Factsheet for VIT_07s0005g06240.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g06200.t01	Wine grape	cytosol, plasma membrane	79.88	44.8
VIT_07s0005g06180.t01	Wine grape	cytosol	71.31	38.96
VIT_07s0005g06220.t01	Wine grape	cytosol	70.32	38.2
VIT_07s0005g06210.t01	Wine grape	cytosol	69.12	37.15
VIT_05s0020g04930.t01	Wine grape	cytosol	36.26	33.89
VIT_06s0009g01350.t01	Wine grape	cytosol	41.43	33.12
KRG98600	Soybean	cytosol, peroxisome	33.27	29.35
KRG98610	Soybean	cytosol	32.67	27.42
KRG98889	Soybean	cytosol	43.63	26.9
KRG98590	Soybean	cytosol	37.85	26.46
KRH62703	Soybean	cytosol	33.86	26.11
KRG98584	Soybean	cytosol	36.85	25.77
KRH56221	Soybean	cytosol	46.02	25.75
KRG98641	Soybean	cytosol	41.24	25.31
KRH56223	Soybean	cytosol	47.01	25.03
VIT_06s0009g01360.t01	Wine grape	cytosol	53.39	24.86
KRH56222	Soybean	cytosol	46.61	24.79
VIT_01s0011g00990.t01	Wine grape	cytosol	38.65	24.43
KRH46198	Soybean	cytosol	41.83	24.31
KRG98640	Soybean	cytosol	41.43	23.96
KRH46576	Soybean	cytosol	30.88	23.92
VIT_02s0012g02720.t01	Wine grape	cytosol, extracellular	44.22	23.85
KRH11715	Soybean	cytosol, endoplasmic reticulum, plasma membrane	34.06	23.82
KRG98651	Soybean	cytosol	37.85	23.81
VIT_01s0011g00960.t01	Wine grape	nucleus	41.24	23.77
KRH56303	Soybean	cytosol	36.26	23.51
KRH46220	Soybean	cytosol	42.23	23.48
KRH45994	Soybean	cytosol	44.22	23.47
KRG98645	Soybean	cytosol	30.68	23.44
KRG89708	Soybean	cytosol	43.23	23.28
VIT_01s0011g00970.t01	Wine grape	cytosol	39.64	23.19
KRH46266	Soybean	cytosol	41.63	23.07
KRG98586	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.43	23.05
KRG89705	Soybean	cytosol	42.43	23.0
KRH00079	Soybean	nucleus	41.04	22.84
VIT_01s0011g00950.t01	Wine grape	cytosol, nucleus, peroxisome	40.24	22.57
KRG98585	Soybean	cytosol	41.24	22.52
KRG98649	Soybean	cytosol	40.64	22.52
KRG98654	Soybean	peroxisome	40.84	22.45
VIT_01s0011g01020.t01	Wine grape	cytosol	40.04	22.31
KRG98595	Soybean	cytosol	40.84	22.28
KRH46192	Soybean	cytosol	40.04	22.26
KRG98602	Soybean	cytosol	40.64	22.17
KRG98637	Soybean	cytosol	40.64	22.15
KRG98583	Soybean	nucleus	40.44	22.09
KRG98721	Soybean	cytosol	39.84	21.93
KRG98599	Soybean	cytosol	21.51	21.91
KRG98635	Soybean	cytosol	16.14	21.83
KRG98648	Soybean	cytosol	38.65	21.63
KRG98719	Soybean	cytosol	38.84	21.59
Os04t0219600-01	Rice	cytosol	30.08	21.54
KRG98720	Soybean	cytosol, plasma membrane	38.65	21.37
KRH76365	Soybean	cytosol	28.69	20.57
VIT_00s0515g00020.t01	Wine grape	cytosol	33.47	19.81
KRG98656	Soybean	cytosol	16.73	18.58
KRG98632	Soybean	cytosol	27.09	17.73
KRG98644	Soybean	endoplasmic reticulum	7.37	12.89
VIT_01s0011g01000.t01	Wine grape	nucleus	40.44	12.88
KRG98659	Soybean	cytosol	7.77	10.32
KRG98700	Soybean	cytosol	1.79	4.25
KRG98589	Soybean	mitochondrion	1.39	4.0
KRG98604	Soybean	cytosol	2.39	3.88
Os04t0219550-00	Rice	cytosol	0.2	1.33

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.8.430	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:CCB60271	ProteinID:CCB60271.1
UniProt:F6I005	EMBL:FN596502	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0006950
GO:GO:0006952	GO:GO:0008150	GO:GO:0043531	InterPro:IPR032675	InterPro:IPR036388	InterPro:LRR_dom_sf
InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PANTHER:PTHR43886	PANTHER:PTHR43886:SF14	SUPFAM:SSF52058
SUPFAM:SSF52540	UniParc:UPI000210A2D4	ArrayExpress:VIT_07s0005g06240	EnsemblPlantsGene:VIT_07s0005g06240	EnsemblPlants:VIT_07s0005g06240.t01	InterPro:WH-like_DNA-bd_sf

Description

No Description!

Coordinates

chr7:-:11264351..11266399

Molecular Weight (calculated)

57276.9 Da

IEP (calculated)

8.600

GRAVY (calculated)

-0.128

Length

502 amino acids

Sequence
(BLAST)

001: MSRSSAEAEY RSMPLFHNFC HITPTLPENK KGSRIIITTR NDDVVAGCKD DYIHRLPHLS PDSSWELFCK KAFQGSCPPE LKKLSDDIVK RCGGLPLAIV
101: AIGGLLSRKE KIVSEWRKFS DSLGFELESN SHLESINTIL SLSYYDLPYQ LKSCFLYLAI FPKDYTIKCG ILTRLWIAEG FVKAKRGVTL EDTAEEFLTE
201: LIHRSLVQVS QVYIDGNIKR CHIHDLMREI ILKKAEELSF CSVMAGEASC FDGRFRRLSI QNSSNNVLDI TSKKSHIRSI FLYNSEMFSL ETLASKFKLL
301: KVLDLGGAPL DRIPEDLGNL FHLRYLSLRK TKVKMLPRSI GKLQNLQTLD LKYSFVEDLP VEINRLQKLR NILCFDFSYN ADLRVDFVRG VHVKEGIGGL
401: EDLQKLDSVD VTYGVPIITE LGKLRQLRKL GITKLSRGNG QRLCASISDM VHIKYLSVCS LSEDEILDLQ YISNPPLLLS TVYLMGRLEK LPDWHYYKKC
501: NL

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.