Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0011g00950.t01 | Wine grape | cytosol, nucleus, peroxisome | 91.73 | 89.27 |
| VIT_01s0011g00970.t01 | Wine grape | cytosol | 75.66 | 76.81 |
| VIT_01s0011g00990.t01 | Wine grape | cytosol | 66.7 | 73.17 |
| VIT_01s0011g01020.t01 | Wine grape | cytosol | 72.45 | 70.03 |
| VIT_05s0020g04930.t01 | Wine grape | cytosol | 27.44 | 44.51 |
| VIT_07s0005g06240.t01 | Wine grape | cytosol | 23.77 | 41.24 |
| VIT_01s0011g01000.t01 | Wine grape | nucleus | 73.13 | 40.42 |
| GSMUA_Achr8P25780_001 | Banana | cytosol | 40.53 | 38.58 |
| VIT_07s0005g06180.t01 | Wine grape | cytosol | 39.38 | 37.32 |
| VIT_02s0012g02720.t01 | Wine grape | cytosol, extracellular | 39.27 | 36.73 |
| VIT_06s0009g01350.t01 | Wine grape | cytosol | 26.41 | 36.62 |
| VIT_07s0005g06210.t01 | Wine grape | cytosol | 38.81 | 36.19 |
| VIT_07s0005g06220.t01 | Wine grape | cytosol | 38.23 | 36.04 |
| Os08t0424700-00 | Rice | cytosol | 35.36 | 33.96 |
| VIT_07s0005g06200.t01 | Wine grape | cytosol, plasma membrane | 34.79 | 33.85 |
| VIT_00s0515g00020.t01 | Wine grape | cytosol | 30.77 | 31.6 |
| VIT_06s0009g01360.t01 | Wine grape | cytosol | 32.61 | 26.35 |
Protein Annotations
| EntrezGene:100252530 | wikigene:100252530 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ProteinID:CCB51048 |
| ProteinID:CCB51048.1 | ncoils:Coil | UniProt:F6HEY8 | EMBL:FN595752 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043531 |
| InterPro:IPR032675 | EntrezGene:LOC100252530 | wikigene:LOC100252530 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43886 | PANTHER:PTHR43886:SF14 | InterPro:RX-like_CC | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | UniParc:UPI0002107F46 | ArrayExpress:VIT_01s0011g00960 | EnsemblPlantsGene:VIT_01s0011g00960 | EnsemblPlants:VIT_01s0011g00960.t01 | RefSeq:XP_002275080 |
| RefSeq:XP_002275080.2 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:812008..816090
Molecular Weight (calculated)
100137.0 Da
IEP (calculated)
9.420
GRAVY (calculated)
-0.236
Length
871 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVQNLGREL RSIEALLRDA ASKKEHDHQF TVWIQNVRDQ AYAIEDVLDL FRLDQESVWR RLKMRHSINN LIQDIDWSLQ NIQRTKERYR SMASYSTNAG
101: NNTYLHVRMA PLFIGNVDTV GIEEPTNKLV SWALEPKQRL EVMFVVGMAG LGKTTLVHSV YERVKQNFDC HVWTTASKSK TKLDILWTLL VEELGCTITQ
201: GADVVALTHK LRKFLNNKRY VIVLDDLWVK DVWESIRLAL PNGKDSRIII TTRRGDIANS CRDDDSIDIH KLQPLSPQRA EQLFYKKAFS RNGRCPSGLE
301: EVSKSILQKC DGLPLGIIEI GRLLSIKAPT KNEWKILHDS LESELRSSGE LSNIMKVLSA SYNDLPYHLK YCFLYMSIFP ESNPVKRRRL IRLWIAEGFV
401: IEKRGKTLEE VGEEYLNELI DRNLIKANEM DFDGRPTSVG VHSLMLKMIL SVSHEENFCT VRTGAVRKLT ENTRRLSIQK EDFDVSQDLP CVRTFFSFCI
501: GKVRIGSNFK LLKVLDIQGT PLEEFPSVIT DLLLLRYLSL RNTNIRRIPR SLGDLHHLET LDLKQTLVTK VPKEVLQLEK LRHLLVYRYN MESVLPFDIV
601: QGFKAPKRMG ALKNLQKLSF VKASGQHRMS RQHSMIQGLE SLTQLRKLGI VELAKEDGTS LCHAIVKMRN LHSLNVTSLN IEVSLELDAM TNPPPLLQRL
701: YLKGPLERFP KWVSSLHDLV RIRLKWSSLA EDPIAALQNL PYLVELQLLD AYTGTQLDFR SGKFQKLKIL DLQQLEQLKS IIMEEGTLPC LQKLIISHCS
801: KLVQVPTGID KLIHLQMLLL HDMPEPFVIR LRKNGGRLRR LVHHIPCLHE VDESNALDLE PKLSQSPPHE F
101: NNTYLHVRMA PLFIGNVDTV GIEEPTNKLV SWALEPKQRL EVMFVVGMAG LGKTTLVHSV YERVKQNFDC HVWTTASKSK TKLDILWTLL VEELGCTITQ
201: GADVVALTHK LRKFLNNKRY VIVLDDLWVK DVWESIRLAL PNGKDSRIII TTRRGDIANS CRDDDSIDIH KLQPLSPQRA EQLFYKKAFS RNGRCPSGLE
301: EVSKSILQKC DGLPLGIIEI GRLLSIKAPT KNEWKILHDS LESELRSSGE LSNIMKVLSA SYNDLPYHLK YCFLYMSIFP ESNPVKRRRL IRLWIAEGFV
401: IEKRGKTLEE VGEEYLNELI DRNLIKANEM DFDGRPTSVG VHSLMLKMIL SVSHEENFCT VRTGAVRKLT ENTRRLSIQK EDFDVSQDLP CVRTFFSFCI
501: GKVRIGSNFK LLKVLDIQGT PLEEFPSVIT DLLLLRYLSL RNTNIRRIPR SLGDLHHLET LDLKQTLVTK VPKEVLQLEK LRHLLVYRYN MESVLPFDIV
601: QGFKAPKRMG ALKNLQKLSF VKASGQHRMS RQHSMIQGLE SLTQLRKLGI VELAKEDGTS LCHAIVKMRN LHSLNVTSLN IEVSLELDAM TNPPPLLQRL
701: YLKGPLERFP KWVSSLHDLV RIRLKWSSLA EDPIAALQNL PYLVELQLLD AYTGTQLDFR SGKFQKLKIL DLQQLEQLKS IIMEEGTLPC LQKLIISHCS
801: KLVQVPTGID KLIHLQMLLL HDMPEPFVIR LRKNGGRLRR LVHHIPCLHE VDESNALDLE PKLSQSPPHE F
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.