Factsheet for GSMUA_Achr8P25780_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0424700-00	Rice	cytosol	45.25	45.65
VIT_05s0020g04930.t01	Wine grape	cytosol	26.01	44.32
VIT_02s0012g02720.t01	Wine grape	cytosol, extracellular	44.92	44.15
KRH74294	Soybean	cytosol	43.61	42.18
KRH39626	Soybean	cytosol	43.17	41.67
VIT_01s0011g00970.t01	Wine grape	cytosol	38.91	41.49
PGSC0003DMT400065023	Potato	cytosol, endoplasmic reticulum	42.95	41.41
Solyc01g086810.2.1	Tomato	nucleus	43.28	41.25
VIT_01s0011g00990.t01	Wine grape	cytosol	35.41	40.81
KRH39629	Soybean	cytosol	41.75	40.77
PGSC0003DMT400016161	Potato	cytosol	27.76	40.64
VIT_01s0011g00960.t01	Wine grape	nucleus	38.58	40.53
KRH74292	Soybean	cytosol	41.2	40.36
VIT_01s0011g01020.t01	Wine grape	cytosol	39.67	40.29
VIT_01s0011g00950.t01	Wine grape	cytosol, nucleus, peroxisome	39.02	39.89
GSMUA_Achr6P29800_001	Banana	cytosol	35.41	36.94
GSMUA_Achr5P04240_001	Banana	cytosol	34.86	35.96
GSMUA_Achr9P12800_001	Banana	cytosol	34.97	34.67
Solyc11g010160.1.1	Tomato	cytosol	33.77	34.07
PGSC0003DMT400094852	Potato	cytosol	33.11	33.44
GSMUA_Achr9P28030_001	Banana	mitochondrion	32.35	32.24
GSMUA_Achr9P28020_001	Banana	cytosol	32.24	32.1
GSMUA_Achr8P30710_001	Banana	cytosol	32.02	27.18
VIT_01s0011g01000.t01	Wine grape	nucleus	39.78	23.1

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	EnsemblPlantsGene:GSMUA_Achr8G25780_001	EnsemblPlants:GSMUA_Achr8P25780_001	EnsemblPlants:GSMUA_Achr8T25780_001	InterPro:IPR032675	InterPro:LRR_dom_sf
UniProt:M0TTN1	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886
PANTHER:PTHR43886:SF14	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000295642D	SEG:seg

Description

Putative Disease resistance protein RPM1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G25780_001]

Coordinates

chr8:-:29538645..29541392

Molecular Weight (calculated)

105870.0 Da

IEP (calculated)

8.822

GRAVY (calculated)

-0.222

Length

915 amino acids

Sequence
(BLAST)

001: MATATLQFAL QKLDSLIIQE QQLLGGVNTG IKDIRDELES LKMFLRETDV SEDKDGIKGW MQQLREIAYD IEDLLEEYMI HFGQPHKYRL LGFLSKGIHH
101: LKHLRTRHRI GVAIQDIKAQ VHNISERRNM YNFNLNSIAS RERLHDRHVA ALFIEEAELV GIDKPKEDII RWLVKGESNQ KVISVVGMGG LGKTTLVRKI
201: YDDEKVKGWF NSHAWITVTQ SFEVSELLKS IINQFYEERH EVLPGRIETM GDIQLIDILR QFLQDKRYLV VLDDLWHINA WDDLKYALPN NDCGSRILIT
301: TRIGDVGISC LETPGHVYKL QPLPPTKAWS LFCKKAFRSI PGRVCPSELQ EISEDIVRVC EGLPLAIVTI AGLLSKKEGV LEWRTMRDNL HAELANNPKL
401: ETIKRILLLS YNDLPYFLKS CFLYFSIFPK ECSVKRITLI RLWIAEGFIE SEKGETMERV AVEYLNDLID RSMIQVAEHY DYGRVRSCRV HDLIHDLIVL
501: KSKEENFSTA LIRQNREIQG RILGRIRRLS THDTGEHLLQ TIDLSHLRAF FVFGENGFSI SSMGNLFNRL KLLKILDLEG APIDSFPVEF GKLPHLRYLS
601: FRNTRINKLS KSLGRLNNLE TLDLKGTYVT ELPKTIINLQ RLRHILAYHY YTGNHPPFYH ADGVKLPQGI GRLRELQKLT YLETDQDSGI VRELGNLTQL
701: KRLGIVKLRR EDGPGLCTSI EKMELLRSFS VTSIGMDEFL NLQSLKSPPP LLQRLYLRGP LETLPNWISS LKYLVRMRLR WSRLKENSLG ILEALPNLIE
801: LTLIHAYDGL KLLCQKGGFQ KLKILDLERL NNLNYVIVDG AMPNLQKMYI RSCMQLKMVP TGIEQLINLK ELHLFDMPDV FVQRLRRLGG MDHQKVSHIP
901: IIRSYDNENR MYEEI

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.