Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P12800_001 | Banana | cytosol | 62.57 | 60.13 |
| HORVU2Hr1G098100.2 | Barley | cytosol | 37.88 | 41.33 |
| TraesCS2D01G413600.1 | Wheat | plastid | 35.17 | 40.94 |
| TraesCS2B01G435600.1 | Wheat | cytosol, plastid | 40.7 | 39.07 |
| Os10t0162854-01 | Rice | cytosol | 28.07 | 38.43 |
| TraesCS2A01G416600.1 | Wheat | plastid | 39.91 | 38.31 |
| KXG26778 | Sorghum | cytosol, plastid | 39.68 | 37.57 |
| TraesCS1D01G064200.1 | Wheat | plastid | 32.24 | 37.09 |
| TraesCS6B01G153000.1 | Wheat | cytosol | 38.56 | 35.92 |
| TraesCS1B01G081600.1 | Wheat | cytosol, golgi, plastid | 37.88 | 35.48 |
| GSMUA_Achr8P25780_001 | Banana | cytosol | 35.96 | 34.86 |
| Os08t0193700-00 | Rice | plastid | 35.4 | 32.81 |
| Solyc08g005440.2.1 | Tomato | cytosol, extracellular | 34.05 | 32.44 |
| AT3G07040.1 | Thale cress | cytosol | 33.6 | 32.18 |
| PGSC0003DMT400047578 | Potato | plasma membrane | 33.93 | 31.89 |
| GSMUA_Achr6P29800_001 | Banana | cytosol | 31.45 | 31.81 |
| GSMUA_Achr9P28020_001 | Banana | cytosol | 32.92 | 31.77 |
| GSMUA_Achr9P28030_001 | Banana | mitochondrion | 32.02 | 30.94 |
| GSMUA_Achr8P30710_001 | Banana | cytosol | 33.15 | 27.27 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P04240_001 | EnsemblPlants:GSMUA_Achr5T04240_001 | EnsemblPlantsGene:GSMUA_Achr5G04240_001 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC |
| InterPro:P-loop_NTPase | InterPro:RX-like_CC | PANTHER:PTHR43886 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI000294E66B | UniProt:M0SVK3 | MapMan:35.1 | : |
Description
Putative Disease resistance protein RPM1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G04240_001]
Coordinates
chr5:-:3070033..3072719
Molecular Weight (calculated)
101353.0 Da
IEP (calculated)
8.052
GRAVY (calculated)
-0.290
Length
887 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRSGKVRGK MVQIGRELEV MNEFLGCTSA YRGDHEQPLS AWAKQIQDVA YEIEDIIDEY NYIVAGRSWG GLGGYIYNAF NDIHKARALC DVITNLEATE
101: ASLADLWRMR SMYGIKIPQK TTTNGPSDER ELSRRVAESA HFMEEDELVG FDGHKDALIK WLVSGDPWRG KASVLGMGGV GKTTLVTSVY KDQTITDHFS
201: CRAWVSVSQN YTTEEVLGKI LRELHQERME EELPQHELDS MEYRRLVETL RSYLHHKRYL VVLDDVWHAD LWNDISYTLL DNHCGSRIVI TTRNQEVSSA
301: STNGCVVRVD PLPEQTAWIL LPFRGEEGNA CPQELEFWAR RLVDKCEGLP LAIVSIANLL SQKERLEPVW KMFHDSLTWS TTTTDNTRLH TVSRILSLSI
401: RDLPHHRRNC LLHCSMFPED YPTGRSRLWV AEGFVKGRGQ RTMEEVAEDY LNQLVGRCLL QVTHTNESGR IQFYRVHDLV RELIMAKSRD EHFAEAYDGR
501: PENTSQRVRR LSITNGGQEA YHHLKRRMPL LRSFHWFSPV SASLISSCRL LRVLGLCSAP VEVLPDEVVC LFNLRYLSIR RTNVRRLPRS LGNLRNLETL
601: DAVHTHIEEL PSGVAKLENL RHLMARSSIA RPRVKVPGGI GNLKGLQTLK AAVADDGMIR HLKKMTQMRS LDVRGVTTIH SVDLCISISK MEHLHRLILM
701: ANHKDDTLLL ANLTPPRRLR KLSLYGKLEK GMLPHWFDSL ANLTHVVLKM SRLKEDAVSA LMASPNLVSL FLMQAFEGNA LRFPAGSLYK LKSLGLCDMA
801: HLNCIEIEGT ALESLQELTL VRCSQLQTIP RGIQSLSGLQ KLELEDMPDE LVEKLREWRQ HYQSIPIIKI WYHINGSWIV ERLSFPS
101: ASLADLWRMR SMYGIKIPQK TTTNGPSDER ELSRRVAESA HFMEEDELVG FDGHKDALIK WLVSGDPWRG KASVLGMGGV GKTTLVTSVY KDQTITDHFS
201: CRAWVSVSQN YTTEEVLGKI LRELHQERME EELPQHELDS MEYRRLVETL RSYLHHKRYL VVLDDVWHAD LWNDISYTLL DNHCGSRIVI TTRNQEVSSA
301: STNGCVVRVD PLPEQTAWIL LPFRGEEGNA CPQELEFWAR RLVDKCEGLP LAIVSIANLL SQKERLEPVW KMFHDSLTWS TTTTDNTRLH TVSRILSLSI
401: RDLPHHRRNC LLHCSMFPED YPTGRSRLWV AEGFVKGRGQ RTMEEVAEDY LNQLVGRCLL QVTHTNESGR IQFYRVHDLV RELIMAKSRD EHFAEAYDGR
501: PENTSQRVRR LSITNGGQEA YHHLKRRMPL LRSFHWFSPV SASLISSCRL LRVLGLCSAP VEVLPDEVVC LFNLRYLSIR RTNVRRLPRS LGNLRNLETL
601: DAVHTHIEEL PSGVAKLENL RHLMARSSIA RPRVKVPGGI GNLKGLQTLK AAVADDGMIR HLKKMTQMRS LDVRGVTTIH SVDLCISISK MEHLHRLILM
701: ANHKDDTLLL ANLTPPRRLR KLSLYGKLEK GMLPHWFDSL ANLTHVVLKM SRLKEDAVSA LMASPNLVSL FLMQAFEGNA LRFPAGSLYK LKSLGLCDMA
801: HLNCIEIEGT ALESLQELTL VRCSQLQTIP RGIQSLSGLQ KLELEDMPDE LVEKLREWRQ HYQSIPIIKI WYHINGSWIV ERLSFPS
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.