Factsheet for TraesCS1B01G081600.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G064200.1	Wheat	plastid	76.14	93.51
TraesCS6B01G153000.1	Wheat	cytosol	75.82	75.42
TraesCS2B01G435600.1	Wheat	cytosol, plastid	61.77	63.31
KXG26778	Sorghum	cytosol, plastid	57.55	58.16
GSMUA_Achr9P12800_001	Banana	cytosol	37.17	38.14
GSMUA_Achr5P04240_001	Banana	cytosol	35.48	37.88
TraesCS1B01G030900.1	Wheat	cytosol	16.05	36.63
TraesCS7B01G345300.1	Wheat	mitochondrion	25.24	34.29
TraesCS2B01G532200.1	Wheat	endoplasmic reticulum	32.0	33.04
TraesCS2B01G225000.1	Wheat	cytosol	30.2	33.03
TraesCS3B01G040100.1	Wheat	cytosol	30.2	32.95
TraesCS1B01G022100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.96	32.45
TraesCS6B01G030900.1	Wheat	cytosol	28.41	32.33
TraesCS6B01G151700.1	Wheat	endoplasmic reticulum	31.68	32.33
TraesCS5B01G416800.1	Wheat	cytosol	28.41	32.25
TraesCS4B01G007500.1	Wheat	cytosol, extracellular	31.26	31.97
TraesCS3B01G483600.1	Wheat	cytosol	17.0	31.63
Solyc08g005440.2.1	Tomato	cytosol, extracellular	30.94	31.47
TraesCS1B01G023100.1	Wheat	endoplasmic reticulum	30.2	31.43
TraesCS1B01G021500.1	Wheat	endoplasmic reticulum	23.65	31.2
PGSC0003DMT400047578	Potato	plasma membrane	31.05	31.14
TraesCS6B01G161400.1	Wheat	cytosol	30.09	31.11
TraesCS7B01G324300.1	Wheat	extracellular	30.83	31.06
TraesCS7B01G323800.1	Wheat	extracellular	30.83	31.06
TraesCS1B01G020900.1	Wheat	cytosol	13.73	31.03
TraesCS1B01G022200.1	Wheat	cytosol	21.54	30.96
AT3G07040.1	Thale cress	cytosol	30.09	30.78
TraesCS1B01G032700.2	Wheat	mitochondrion	20.06	30.74
TraesCS5B01G301500.1	Wheat	plasma membrane	27.03	30.66
TraesCS2B01G058900.1	Wheat	cytosol	28.93	29.98
TraesCS2B01G007600.1	Wheat	mitochondrion	13.83	29.98
TraesCS4B01G091600.1	Wheat	cytosol	20.17	29.38
TraesCS1B01G021900.1	Wheat	cytosol, extracellular	28.41	29.37
TraesCS1B01G020400.1	Wheat	endoplasmic reticulum	28.09	29.2
TraesCS1B01G020300.1	Wheat	cytosol	28.83	28.53
TraesCS3B01G483700.1	Wheat	cytosol	27.46	28.08
TraesCS1B01G377400.1	Wheat	cytosol	25.98	27.92
TraesCS2B01G504900.1	Wheat	cytosol	26.08	27.44
TraesCS4B01G091900.1	Wheat	endoplasmic reticulum	26.93	27.3
TraesCS3B01G344500.1	Wheat	cytosol	24.71	26.59

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	InterPro:AAA+_ATPase	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF31	InterPro:RX-like_CC
SMART:SM00382	SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS1B01G081600	EnsemblPlants:TraesCS1B01G081600.1	TIGR:cd01983
TIGR:cd14798	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:63966501..63969344

Molecular Weight (calculated)

106709.0 Da

IEP (calculated)

8.658

GRAVY (calculated)

-0.031

Length

947 amino acids

Sequence
(BLAST)

001: MAELIAISLS AKVAAALLRT GRSTAVFLAS FVSIRSGIAA AACDLDLLRA FLRFADSHRG TNELVDAWVN QVRHVGFELE DVTDEYTFLS SVGFVRACAD
101: VAARFALLRR LRKARERLRA LSAVKEQLGI RPTEASASSS APAAAAICRN ISEAAHFVVE GEIVGFAEHT RLLMKWLTGD ANPRRIIVAV CGMGGVGKTT
201: LATNVYKKIA ANCNFDCTAW VTVSKNFTTE DLIRRIIKEL HRGVRDSALG DTQEMDYRSL VEALRGHLAH KRYFLLLDDV WNADAWFQLR SALLDSETGS
301: RVVITTRNQE VAALASDNRT IMLQPLPEHE AWSLFCSTTF REDANQECAY HLQNWALKIL QKCCGLPLAI ISVGNLLLLK EKTEFAWKNV HDSLVWDEKD
401: DHGIGHVASV LNFSIDDLPY RLKRCFLYCS VYPEDFFIKR KILIREWIAQ GLIVETGHGT MEEVADGYVN ELVQRNLLLV KLKNEFGRAK RLHIHDLIRE
501: IAAYRSKEDG FFQLSTSARV DLKQKIRYLT LYQCQSDHQS TPNMPSLRSF YVLRSDLDVA LFSRFRLLTV LNLWYVKGSK LPSAVANLRN LRYLGVRSTY
601: IEELPKELGR LRDLQTLDAK WSSIKVLPSS ITKLKNLRHL ILFTRGTTDF MEPEPGTAVS LPDGLENLKC LQTLKYVQAD QKVIKSLESL EQMRSLELFG
701: VDQRILIDLP SALSKMSCLL RLGITNSDAN VTLDLEPFSP APVKLKTLNL TGKLARGKLP SWFGSLTNLI HLHLRSSELG EDSIVLLSSL PRLLHLSLIN
801: ACNERSLTFV AGCFPVLRQL NLQGLPNLTS IEFQKDSLAD LHLLTLGLCL ELTEIPRSIE NLIHLENVEL FQMPSKFIEK IPYGKGHGAN HRDDQRITVV
901: KNFFWHNARL LEQKIYINLS NVQESFKTDA VTLPVGSVNS SKFHKWL

Best Arabidopsis Sequence Match ( AT1G58848.1 )
(BLAST)

0001: MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNL LSSFLKDADA KKHTSAVVKN CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY

Arabidopsis Description

RF9Probable disease resistance protein RDL6 [Source:UniProtKB/Swiss-Prot;Acc:P0DI18]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.