Factsheet for TraesCS5B01G416800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G422100.1	Wheat	cytosol	71.34	90.15
TraesCS5A01G413500.1	Wheat	endoplasmic reticulum, golgi	96.04	87.35
TraesCS7B01G345300.1	Wheat	mitochondrion	63.19	75.61
TraesCS2B01G532200.1	Wheat	endoplasmic reticulum	75.06	68.27
TraesCS2B01G007600.1	Wheat	mitochondrion	33.57	64.07
TraesCS1B01G023100.1	Wheat	endoplasmic reticulum	59.47	54.51
TraesCS6B01G151700.1	Wheat	endoplasmic reticulum	60.07	53.99
TraesCS6B01G030900.1	Wheat	cytosol	53.24	53.37
TraesCS4B01G091600.1	Wheat	cytosol	28.9	37.08
TraesCS2B01G058900.1	Wheat	cytosol	39.81	36.32
TraesCS5B01G301500.1	Wheat	plasma membrane	35.13	35.09
TraesCS1B01G032700.2	Wheat	mitochondrion	25.9	34.95
TraesCS1B01G030900.1	Wheat	cytosol	17.15	34.46
TraesCS3B01G483600.1	Wheat	cytosol	20.62	33.79
TraesCS2B01G504900.1	Wheat	cytosol	35.73	33.11
TraesCS3B01G040100.1	Wheat	cytosol	34.05	32.72
TraesCS1B01G020400.1	Wheat	endoplasmic reticulum	35.73	32.71
TraesCS3B01G483700.1	Wheat	cytosol	35.73	32.18
TraesCS7B01G323800.1	Wheat	extracellular	36.21	32.13
TraesCS1B01G021900.1	Wheat	cytosol, extracellular	35.25	32.1
TraesCS7B01G324300.1	Wheat	extracellular	36.09	32.02
TraesCS6B01G161400.1	Wheat	cytosol	35.13	31.99
TraesCS4B01G091900.1	Wheat	endoplasmic reticulum	35.61	31.8
TraesCS2B01G225000.1	Wheat	cytosol	32.85	31.64
TraesCS1B01G377400.1	Wheat	cytosol	33.09	31.33
TraesCS2B01G435600.1	Wheat	cytosol, plastid	34.05	30.74
TraesCS1B01G020900.1	Wheat	cytosol	15.11	30.07
TraesCS1B01G022100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.54	29.33
TraesCS1B01G021500.1	Wheat	endoplasmic reticulum	25.18	29.25
TraesCS1B01G022200.1	Wheat	cytosol	23.02	29.14
TraesCS6B01G153000.1	Wheat	cytosol	32.85	28.78
Solyc08g005440.2.1	Tomato	cytosol, extracellular	31.77	28.46
TraesCS1B01G081600.1	Wheat	cytosol, golgi, plastid	32.25	28.41
AT3G07040.1	Thale cress	cytosol	31.41	28.29
TraesCS4B01G007500.1	Wheat	cytosol, extracellular	31.06	27.97
PGSC0003DMT400047578	Potato	plasma membrane	31.41	27.75
TraesCS3B01G344500.1	Wheat	cytosol	28.9	27.39
TraesCS1B01G020300.1	Wheat	cytosol	29.98	26.12

Protein Annotations

EnsemblPlants:TraesCS5B01G416800.1	EnsemblPlantsGene:TraesCS5B01G416800	Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PANTHER:PTHR43886	PANTHER:PTHR43886:SF5	PFAM:PF00931	PRINTS:PR00364	SEG:seg
SUPFAM:SSF52058	SUPFAM:SSF52540	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5B:+:591521761..591524265

Molecular Weight (calculated)

95185.1 Da

IEP (calculated)

7.530

GRAVY (calculated)

-0.159

Length

834 amino acids

Sequence
(BLAST)

001: MEDMVDEYLY LVGQEHDIGS CFYLKRGFRK SRSLLSMNQL AFKVKEIEKD LSHLSETNKR WVPMTISGVS GATSSCDYIV KRGQDLANIS RSLDEEDLVG
101: VAENREKLGQ WLADDDLECS VIALLGMGGL GKTTLAANVY RNERKKFQCH AWVSISQSYS REDVLRNICK ELFKDDVSVL SKSAAMDITC LEETLKSFLE
201: QRKYLIILDD VWTPETFDDL SRMLIHNDKG SRLIITTREG DVAALASPGH ILTLEALRED KSWDLFCKKT FAKETNHDCH AELKPLSREI VSRCKGLPLA
301: IVSVASLLRV REKTVEELNN QLIWEIMNNS RLDHIRNVLH LSFIYLPTHL KSCFLYCSLF PEDYLLKRKQ LVRLWIAEGF IEGRGESTLE EVAEGYLKEL
401: VDRNMLQLVK MNSFGRIKEF KMHDILRELA VDLCQKNYFG VSQEAKCEGS LEMDGRRLML DKINNDVQQS FSGLHQLRSV ITSGDSKSPF TLLPLLCKES
501: RYMTVLELSG IPIKKIPDAI GYLFNLRHLG LRNSKVKMLP RSVEKLSNLL TLDLCKSDIH ELPSGIVKLK KLRHLFVEKI MDPDWRNINH LGGMCIPNGL
601: RNLTNLQTLQ ALEVQDESLR HLGELRQLKS LRLLNVKGIY CECISESLVQ MRHLSLLSVN ASDGNEVLLL NVLLPSLQKL RLRGRLLEGA LDESPLFQAV
701: GGQNLYELVL SWSQLTKDPL PSLSRLSSLT RLHFTRAYTG EHLSFLTEWF PKLKVLSLTD LPNLKRLEIQ QGAMGSLEHL FLIRLSSMTE VPPGIEFVMP
801: LEYLGFHEIT GDFLSLLRHC SAIRGTRLRY SLRD

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.