Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G136900.1 | Wheat | cytosol, endoplasmic reticulum | 94.83 | 95.97 |
| TraesCS4A01G175700.1 | Wheat | cytosol | 89.33 | 95.84 |
| TraesCS1B01G023100.1 | Wheat | endoplasmic reticulum | 62.72 | 63.96 |
| TraesCS7B01G345300.1 | Wheat | mitochondrion | 47.52 | 63.27 |
| TraesCS2B01G532200.1 | Wheat | endoplasmic reticulum | 61.21 | 61.94 |
| TraesCS5B01G416800.1 | Wheat | cytosol | 53.99 | 60.07 |
| TraesCS2B01G007600.1 | Wheat | mitochondrion | 27.69 | 58.81 |
| TraesCS6B01G030900.1 | Wheat | cytosol | 49.46 | 55.17 |
| TraesCS5B01G301500.1 | Wheat | plasma membrane | 36.53 | 40.6 |
| TraesCS2B01G058900.1 | Wheat | cytosol | 38.9 | 39.5 |
| TraesCS4B01G091600.1 | Wheat | cytosol | 27.16 | 38.77 |
| TraesCS3B01G483600.1 | Wheat | cytosol | 21.23 | 38.7 |
| TraesCS1B01G030900.1 | Wheat | cytosol | 17.24 | 38.55 |
| TraesCS1B01G032700.2 | Wheat | mitochondrion | 24.78 | 37.22 |
| TraesCS2B01G504900.1 | Wheat | cytosol | 35.78 | 36.89 |
| TraesCS7B01G323800.1 | Wheat | extracellular | 36.31 | 35.85 |
| TraesCS1B01G020400.1 | Wheat | endoplasmic reticulum | 35.13 | 35.78 |
| TraesCS7B01G324300.1 | Wheat | extracellular | 36.21 | 35.74 |
| TraesCS6B01G161400.1 | Wheat | cytosol | 35.02 | 35.48 |
| TraesCS4B01G091900.1 | Wheat | endoplasmic reticulum | 35.56 | 35.33 |
| TraesCS1B01G021900.1 | Wheat | cytosol, extracellular | 34.7 | 35.15 |
| TraesCS3B01G483700.1 | Wheat | cytosol | 35.02 | 35.1 |
| TraesCS1B01G377400.1 | Wheat | cytosol | 33.08 | 34.85 |
| TraesCS1B01G022100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 23.92 | 34.63 |
| TraesCS2B01G435600.1 | Wheat | cytosol, plastid | 33.73 | 33.87 |
| TraesCS1B01G021500.1 | Wheat | endoplasmic reticulum | 26.08 | 33.7 |
| TraesCS1B01G022200.1 | Wheat | cytosol | 23.38 | 32.93 |
| TraesCS2B01G225000.1 | Wheat | cytosol | 30.5 | 32.68 |
| TraesCS3B01G040100.1 | Wheat | cytosol | 30.28 | 32.37 |
| TraesCS1B01G020900.1 | Wheat | cytosol | 14.33 | 31.74 |
| TraesCS1B01G081600.1 | Wheat | cytosol, golgi, plastid | 32.33 | 31.68 |
| TraesCS4B01G007500.1 | Wheat | cytosol, extracellular | 31.57 | 31.64 |
| TraesCS6B01G153000.1 | Wheat | cytosol | 31.9 | 31.09 |
| Solyc08g005440.2.1 | Tomato | cytosol, extracellular | 30.17 | 30.08 |
| TraesCS3B01G344500.1 | Wheat | cytosol | 28.34 | 29.89 |
| TraesCS1B01G020300.1 | Wheat | cytosol | 30.6 | 29.68 |
| AT3G07040.1 | Thale cress | cytosol | 28.99 | 29.05 |
| PGSC0003DMT400047578 | Potato | plasma membrane | 29.42 | 28.92 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43886 | PANTHER:PTHR43886:SF5 | InterPro:RX-like_CC | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS6B01G151700 | EnsemblPlants:TraesCS6B01G151700.1 | TIGR:cd14798 | SEG:seg |
Description
No Description!
Coordinates
chr6B:-:155549819..155552822
Molecular Weight (calculated)
106001.0 Da
IEP (calculated)
8.321
GRAVY (calculated)
-0.188
Length
928 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEVVILMAV AKIGVALGNE AMNQATLQFY NFITQLTELQ GSMGRIRREL RLMHEYLCRM DIRNRNNQTY EIWVEEVRML VHGIEDIVDE YLHLVGQKHD
101: SGWSAYLKKG FKQPNVLFSL NRVASLVKEA EVNLVHLFQA KDRWVSMVDS GYMNDSSYIV ERSQHLASTS RSLAEEDLVE VDGNRKKLEQ WLAGDELERS
201: VVVLHGMGGL GKTTLAANVY RKETENFDCH CWVSVSQTYS REDVLKKLIK ELFKDKAIVP SNIETMDIIS LEEALKNFLE QRKYLIMLDD VWTPEAFHDL
301: SGVVIRNKKG SRVVITTREG NVARLASQGQ VLTLKPLSKD GSWQLFCKTA FPRDTKCECP TELTELAHEV VDKCKGIPLA IVSIGKLLFV RDKTKEELKR
401: IHDQLDWELV NNPSLEHVRN ILYLSYLYLP TYLKSCFLYC SLFPEDYLFK RKKLIRLWVA EGFVKGRGES TMEEVAEGYL EELVHRNMLQ VDTRNPFGRI
501: KSFRMHDIVR ELAVDLCRRE CFGVVYEEDK YMESLDEMDA RRLVIHKMKK DIYQSVSGVH RLRSVIALDI NIPSTLLPLI AMKSRYMSVL ELSGLPIEKV
601: PDGIGDLFNL RYLGLRGSKV KLLPRSIEKL SSLLTLDLSG SGMKELPRGI GKLKKLRQLF TDKASDRFRR DFRCGSGVCI PKGLENLTSL QTLVSLEAQD
701: ESVRQLGELR QLRSLEIWNV KGTYCGHISA SLAGMRHLSY LHVNASEDNE VLRLSGLPPN LQRISLTGRL AEGTLVESPL FQTAGRNLYS LSLSWSQMIQ
801: DPLPSLSRLS NLSDLMLTRA YRGKQMTFLA GWFPKLKTLR LRDLPNLEVL EMKEGAVVSL EILTLVNLEG MVEVPPGIEF LAHVKHISFR EITSEFLTSL
901: RQCPRTQGMQ WRHTLRSIWC SGSSAPEI
101: SGWSAYLKKG FKQPNVLFSL NRVASLVKEA EVNLVHLFQA KDRWVSMVDS GYMNDSSYIV ERSQHLASTS RSLAEEDLVE VDGNRKKLEQ WLAGDELERS
201: VVVLHGMGGL GKTTLAANVY RKETENFDCH CWVSVSQTYS REDVLKKLIK ELFKDKAIVP SNIETMDIIS LEEALKNFLE QRKYLIMLDD VWTPEAFHDL
301: SGVVIRNKKG SRVVITTREG NVARLASQGQ VLTLKPLSKD GSWQLFCKTA FPRDTKCECP TELTELAHEV VDKCKGIPLA IVSIGKLLFV RDKTKEELKR
401: IHDQLDWELV NNPSLEHVRN ILYLSYLYLP TYLKSCFLYC SLFPEDYLFK RKKLIRLWVA EGFVKGRGES TMEEVAEGYL EELVHRNMLQ VDTRNPFGRI
501: KSFRMHDIVR ELAVDLCRRE CFGVVYEEDK YMESLDEMDA RRLVIHKMKK DIYQSVSGVH RLRSVIALDI NIPSTLLPLI AMKSRYMSVL ELSGLPIEKV
601: PDGIGDLFNL RYLGLRGSKV KLLPRSIEKL SSLLTLDLSG SGMKELPRGI GKLKKLRQLF TDKASDRFRR DFRCGSGVCI PKGLENLTSL QTLVSLEAQD
701: ESVRQLGELR QLRSLEIWNV KGTYCGHISA SLAGMRHLSY LHVNASEDNE VLRLSGLPPN LQRISLTGRL AEGTLVESPL FQTAGRNLYS LSLSWSQMIQ
801: DPLPSLSRLS NLSDLMLTRA YRGKQMTFLA GWFPKLKTLR LRDLPNLEVL EMKEGAVVSL EILTLVNLEG MVEVPPGIEF LAHVKHISFR EITSEFLTSL
901: RQCPRTQGMQ WRHTLRSIWC SGSSAPEI
001: MAGELVSFGI KKLWDLLSQE CEQFQGVEDQ VTGLKRDLNL LSSFLKDADA KKHTTAVVRN VVEEIKEIVY DAEDIIETYL LKEKLWKTSG IKMRIRRHAC
101: IISDRRRNAL DVGGIRTRIS DVIRDMQSFG VQQAIVDGGY MQPQGDRQRE MRQTFSKDYE SDFVGLEVNV KKLVGYLVDE ENVQVVSITG MGGLGKTTLA
201: RQVFNHEDVK HQFDRLAWVC VSQEFTRKNV WQMILQNLTS REKKDEILQM EEAELHDKLF QLLETSKSLI VFDDIWKDED WDLIKPIFPP NKGWKVLLTS
301: QNESVAVRGD IKYLNFKPEC LAIEDSWTLF QRIAFPKKDA SESKVDEEME DMGKQMLKHC GGLPLAIKVL GGLLAAKYTM HDWERLSVNI GSDIVGRTSS
401: NNSSIYHVLS MSFEELPSYL KHCFLYLAHF PEDHKINVEK LSYCWAAEGI STAEDYHNGE TIQDVGQSYL EELVRRNMII WERDATASRF GTCHLHDMMR
501: EVCLFKAKEE NFLQIAVKSV GVTSSSTGNS QSPCRSRRLV YQCPTTLHVE RDINNPKLRS LVVLWHDLWV ENWKLLGTSF TRLKLLRVLD LFYVDFEGMK
601: LPFGIGNLIH LRYLSLQDAK VSHLPSSLGN LMLLIYLNLD VDTEFIFVPD VFMRMHELRY LKLPLHMHKK TRLSLRNLVK LETLVYFSTW HSSSKDLCGM
701: TRLMTLAIRL TRVTSTETLS ASISGLRNLE YLYIVGTHSK KMREEGIVLD FIHLKHLLLD LYMPRQQHFP SRLTFVKLSE CGLEEDPMPI LEKLLHLKGV
801: ILLKGSYCGR RMVCSGGGFP QLKKLEIVGL NKWEEWLVEE GSMPLLETLS ILDCEELKEI PDGLRFIYSL ELVMLGTRWK KKFSVGGEDY YKVQHIPSVE
901: FIGGYLK
101: IISDRRRNAL DVGGIRTRIS DVIRDMQSFG VQQAIVDGGY MQPQGDRQRE MRQTFSKDYE SDFVGLEVNV KKLVGYLVDE ENVQVVSITG MGGLGKTTLA
201: RQVFNHEDVK HQFDRLAWVC VSQEFTRKNV WQMILQNLTS REKKDEILQM EEAELHDKLF QLLETSKSLI VFDDIWKDED WDLIKPIFPP NKGWKVLLTS
301: QNESVAVRGD IKYLNFKPEC LAIEDSWTLF QRIAFPKKDA SESKVDEEME DMGKQMLKHC GGLPLAIKVL GGLLAAKYTM HDWERLSVNI GSDIVGRTSS
401: NNSSIYHVLS MSFEELPSYL KHCFLYLAHF PEDHKINVEK LSYCWAAEGI STAEDYHNGE TIQDVGQSYL EELVRRNMII WERDATASRF GTCHLHDMMR
501: EVCLFKAKEE NFLQIAVKSV GVTSSSTGNS QSPCRSRRLV YQCPTTLHVE RDINNPKLRS LVVLWHDLWV ENWKLLGTSF TRLKLLRVLD LFYVDFEGMK
601: LPFGIGNLIH LRYLSLQDAK VSHLPSSLGN LMLLIYLNLD VDTEFIFVPD VFMRMHELRY LKLPLHMHKK TRLSLRNLVK LETLVYFSTW HSSSKDLCGM
701: TRLMTLAIRL TRVTSTETLS ASISGLRNLE YLYIVGTHSK KMREEGIVLD FIHLKHLLLD LYMPRQQHFP SRLTFVKLSE CGLEEDPMPI LEKLLHLKGV
801: ILLKGSYCGR RMVCSGGGFP QLKKLEIVGL NKWEEWLVEE GSMPLLETLS ILDCEELKEI PDGLRFIYSL ELVMLGTRWK KKFSVGGEDY YKVQHIPSVE
901: FIGGYLK
Arabidopsis Description
Probable disease resistance protein At1g58390 [Source:UniProtKB/Swiss-Prot;Acc:Q8W474]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.