Factsheet for TraesCS1B01G032700.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G091600.1	Wheat	cytosol	60.36	57.38
TraesCS1B01G020400.1	Wheat	endoplasmic reticulum	79.13	53.68
TraesCS1B01G021900.1	Wheat	cytosol, extracellular	78.32	52.84
Os11t0229300-00	Rice	cytosol	55.02	52.23
Os11t0227700-01	Rice	cytosol	46.12	44.05
TraesCS4B01G091900.1	Wheat	endoplasmic reticulum	62.78	41.54
EES09609	Sorghum	cytosol	60.84	41.46
TraesCS2B01G504900.1	Wheat	cytosol	59.06	40.56
TraesCS3B01G483700.1	Wheat	cytosol	59.71	39.85
TraesCS1B01G377400.1	Wheat	cytosol	51.46	36.1
TraesCS1B01G030900.1	Wheat	cytosol	23.46	34.94
TraesCS7B01G345300.1	Wheat	mitochondrion	35.92	31.85
TraesCS2B01G007600.1	Wheat	mitochondrion	22.33	31.58
TraesCS6B01G030900.1	Wheat	cytosol	35.92	26.68
TraesCS1A01G026200.1	Wheat	cytosol, endoplasmic reticulum	17.15	25.92
TraesCS5B01G416800.1	Wheat	cytosol	34.95	25.9
TraesCS2B01G058900.1	Wheat	cytosol	37.86	25.6
TraesCS3B01G483600.1	Wheat	cytosol	20.87	25.34
TraesCS2B01G532200.1	Wheat	endoplasmic reticulum	37.22	25.08
TraesCS6B01G151700.1	Wheat	endoplasmic reticulum	37.22	24.78
TraesCS1B01G023100.1	Wheat	endoplasmic reticulum	35.28	23.96
TraesCS3B01G040100.1	Wheat	cytosol	32.85	23.39
TraesCS2B01G225000.1	Wheat	cytosol	32.36	23.09
TraesCS5B01G301500.1	Wheat	plasma membrane	31.07	22.99
TraesCS7B01G323800.1	Wheat	extracellular	34.63	22.77
TraesCS1B01G021500.1	Wheat	endoplasmic reticulum	26.38	22.7
TraesCS7B01G324300.1	Wheat	extracellular	34.14	22.45
TraesCS4B01G007500.1	Wheat	cytosol, extracellular	31.55	21.06
TraesCS2B01G435600.1	Wheat	cytosol, plastid	31.39	21.0
AT3G07040.1	Thale cress	cytosol	30.74	20.52
TraesCS3B01G344500.1	Wheat	cytosol	29.13	20.45
TraesCS1B01G022100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.2	20.44
TraesCS6B01G161400.1	Wheat	cytosol	29.94	20.2
Solyc08g005440.2.1	Tomato	cytosol, extracellular	30.26	20.09
TraesCS1B01G081600.1	Wheat	cytosol, golgi, plastid	30.74	20.06
TraesCS1B01G022200.1	Wheat	cytosol	21.2	19.88
TraesCS6B01G153000.1	Wheat	cytosol	30.58	19.85
PGSC0003DMT400047578	Potato	plasma membrane	30.26	19.81
TraesCS1B01G020300.1	Wheat	cytosol	30.26	19.54
TraesCS1B01G020900.1	Wheat	cytosol	10.52	15.51

Protein Annotations

EnsemblPlants:TraesCS1B01G032700.2	EnsemblPlantsGene:TraesCS1B01G032700	Gene3D:1.10.8.430	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
PANTHER:PTHR43886	PANTHER:PTHR43886:SF1	PFAM:PF00931	SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:15877482..15879338

Molecular Weight (calculated)

69474.4 Da

IEP (calculated)

8.064

GRAVY (calculated)

-0.178

Length

618 amino acids

Sequence
(BLAST)

001: MCSAFQGLQG SRVMITTRRE DVAALALASR RLQLQPLGRD ESFKLFCSRA FHNTPDRKCP PELEKVAGDV VKKCHGLPLT IVSSGSLLST KQPTQHAWNH
101: MYNHLRSELQ ANNHAQAILN LSYHDLPGDL RNCFLYCSLF PEDYAMSREN LVRLWVAEGF AMKKDNSAPE EVAEGNLMEL IGRNMLEVVE RDELFRVSKC
201: KMHDIVRDLA LVIAKEERFG SANDQGEMMR VDKEVRRFST CGWRDSNTVA TEVEFPRLRT VISLGATSSS TNMISSVLSG SSYLTVLELQ DSAINQLPVS
301: IGNLFNLRYI GLRRTNVQSL PDTIEKLSNL ETLDVKQTRI EKLPPGIVKV AKLQHLLADR FADEKQAQFR YFVGVEAPKT ISNFKELQTL ETVHASKDLS
401: LELKKMSKLQ TVWIDDINAS NCDDLFKTLS VLPQLSSLLL CACDEKETLS FQALKPMSEK LHRLIIRGGW AAGTLKCPIF KDHGKNLKYL ALSWCNLGTE
501: DPLQLLSSHL SALTYLSLNR VSSAGTLVLS AGCFSELKTL VLKSMPDVKQ LEIKEGAIPC IDGIYIVSLS ELSMVPRGIE ALGSLKKLWM LYLHKGFKDD
601: WDQKEMHNKM KHVLEIRA

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.