Factsheet for TraesCS1B01G020300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

endoplasmic reticulum 3
plasma membrane 3
vacuole 3
golgi 3
extracellular 3
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	89.86	92.97
TraesCS1B01G022100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.92	80.5
TraesCS1B01G022200.1	Wheat	cytosol	53.81	78.15
TraesCS1B01G020900.1	Wheat	cytosol	33.96	77.57
TraesCS4B01G007500.1	Wheat	cytosol, extracellular	73.67	76.13
TraesCS1B01G021500.1	Wheat	endoplasmic reticulum	55.59	74.09
TraesCS1B01G030900.1	Wheat	cytosol	27.17	62.65
EES08155	Sorghum	cytosol	52.56	55.15
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.71	55.09
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.56	53.91
TraesCS2B01G225000.1	Wheat	cytosol	47.96	53.0
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	52.87	52.71
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	50.99	52.7
TraesCS3B01G040100.1	Wheat	cytosol	40.86	45.05
TraesCS3B01G483600.1	Wheat	cytosol	17.45	32.81
TraesCS5B01G301500.1	Wheat	plasma membrane	27.38	31.38
TraesCS1B01G377400.1	Wheat	cytosol	28.42	30.87
TraesCS6B01G151700.1	Wheat	endoplasmic reticulum	29.68	30.6
TraesCS2B01G532200.1	Wheat	endoplasmic reticulum	29.05	30.32
TraesCS1B01G020400.1	Wheat	endoplasmic reticulum	28.84	30.3
Solyc08g005440.2.1	Tomato	cytosol, extracellular	29.47	30.29
TraesCS1B01G032700.2	Wheat	mitochondrion	19.54	30.26
TraesCS1B01G021900.1	Wheat	cytosol, extracellular	28.94	30.24
TraesCS6B01G161400.1	Wheat	cytosol	28.94	30.24
TraesCS7B01G345300.1	Wheat	mitochondrion	21.94	30.13
AT3G07040.1	Thale cress	cytosol	29.05	30.02
PGSC0003DMT400047578	Potato	plasma membrane	29.57	29.98
TraesCS5B01G416800.1	Wheat	cytosol	26.12	29.98
TraesCS2B01G435600.1	Wheat	cytosol, plastid	28.42	29.44
TraesCS6B01G153000.1	Wheat	cytosol	29.26	29.41
TraesCS2B01G058900.1	Wheat	cytosol	28.0	29.32
TraesCS1B01G023100.1	Wheat	endoplasmic reticulum	27.8	29.23
TraesCS3B01G483700.1	Wheat	cytosol	27.9	28.83
TraesCS1B01G081600.1	Wheat	cytosol, golgi, plastid	28.53	28.83
TraesCS2B01G504900.1	Wheat	cytosol	27.06	28.78
TraesCS4B01G091600.1	Wheat	cytosol	19.44	28.62
TraesCS6B01G030900.1	Wheat	cytosol	24.87	28.61
TraesCS7B01G323800.1	Wheat	extracellular	27.9	28.4
TraesCS4B01G091900.1	Wheat	endoplasmic reticulum	27.48	28.16
TraesCS7B01G324300.1	Wheat	extracellular	27.48	27.98
KRG98601	Soybean	cytosol	10.97	27.78
TraesCS3B01G344500.1	Wheat	cytosol	25.29	27.5
TraesCS2B01G007600.1	Wheat	mitochondrion	12.33	27.0

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF24	InterPro:RX-like_CC	SUPFAM:SSF52058
SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS1B01G020300	EnsemblPlants:TraesCS1B01G020300.1	TIGR:cd14798	SEG:seg	:

Description

No Description!

Coordinates

chr1B:-:9547212..9550587

Molecular Weight (calculated)

107668.0 Da

IEP (calculated)

8.470

GRAVY (calculated)

-0.158

Length

957 amino acids

Sequence
(BLAST)

001: MAEAVVGQLV VTLGGALAKE AAIFGGALLG KEAAALRGLF GKICDSKVEL ESMQAYLQEA ERFKDTDKTT AIFVGQVRGL AFQIEDVVDE FTYKLEDCRH
101: GGFAGKMKKR LKHIKTWRRL AAKLQEIKAQ LQDANRRKKD YAVTGRFASS ARSTNQGQAL HFTRDEDLVG IEENRDRLIR WLTVSGGSGH GLEQSSSKVT
201: SVWGMPGVGK TTLVAHVYNT VKVNFDAAAW VTVSESYRIE DLLKKIAAQF GITVDVADIE MRDIAESIHN YLQGKKFIMV LDDVWAARVW SEIRNVFPTS
301: NCTGRYVIIS RKHEVSLLAT RESAIHLEPL HAHHSWELFC KGAFWNDDGK ECPLELQELT WKFIAKCQGL PIAIACIGRL LSCKPPTSAE WENVYRGLDS
401: QLTKDAIPDA HMILKVSLED LPYDLKNCFL HCALFQQDYV LKRRRITRQW IAAGFIREKE NKTLEEMAEG YLAELVNRSL LQVVKRNHAG RLKHCQMHDV
501: IGLLALNKAK EECFGKFYDG YGSGAFSVEG ARRISVQGEN LEQLSRSGAK QLRALHVFGR YINIDLPKPI LRFSNFLSML DLQGSCIKML PNEVFSLFSL
601: RYLGLRDTNL ESLPEAVGKL WKEVLDAVHS KLTCLPNSVV KLKKLRCLRA FTTSRSKIGR IRGVKVPSGI HHLAGLRALQ SIEASPEFLR EVGALTELRT
701: FGVCNVRSEH SSYLGNAITR MSHLIHLDVG AATEDEVLRL EGLYLPSTLS LLGLTGQLNK TSTPQHFSSW SLLNSVTRLY LAFSNIDEGT FSCLCVLRAL
801: STLELVQAFE GKRLDFYAAS FPKLRFLHIW GAAQLNQVGI EEGAMQNLVE LWFTECPELK FLPDGIQHLA ALEKLLLKDT SEELVEKLRQ KRDSDECNED
901: VMKISRIRNV TVELSQKGLW KRIRWSSLFT RSWAVACQAH ADHLDHNLNE NLGYSLD

Best Arabidopsis Sequence Match ( AT1G58400.2 )
(BLAST)

001: MVEAIVSFGV EKLWDRLTQE YEQFQGVEDR IAELKSNLNL LKSFLKDAEA KKNTSQMVRH CVEEIKEIVY DTENMIETFI LKEAARKRSG IIRRITKLTC
101: IKVHRWEFAS DIGGISKRIS KVIQDMHSFG VQQMISDGSQ SSHLLQERER EMRQTFSRGY ESDFVGLEVN VKKLVGYLVE EDDIQIVSVT GMGGLGKTTL
201: ARQVFNHEDV KHQFDRLAWV CVSQEFTRKN VWQMILQNLT SRETKDEILQ MEEAELHDEL FQLLETSKSL IVFDDIWKEE DWGLINPIFP PKKGWKVLIT
301: SRTETIAMHG NRRYVNFKPE CLTILESWIL FQRIAMPRVD ESEFKVDKEM EMMGKQMIKY CGGLPLAVKV LGGLLAAKYT FHDWKRLSEN IGCHIVGRTD
401: FSDGNNSSVY HVLSLSFEEL PSYLKHCFLY LAHFPEDHNI KVEKLSYCWA AEGILEPRHY HGQTIRDVGE SYIEELVRRN MVIAERDVTT LRFEACHLHD
501: MMREVCLLKA KEENFVQIAS ILPPTANSQY PGTSRRFVSQ NPTTLHVSRD INNPKLQSLL IVWENRRKSW KLLGSSFIRL ELLRVLDLYK AKFEGRNLPS
601: GIGKLIHLRY LNLDLARVSR LPSSLGNLRL LIYLDINVCT KSLFVPNCLM GMHELRYLRL PFNTSKEIKL GLCNLVNLET LENFSTENSS LEDLRGMVSL
701: RTLTIGLFKH ISKETLFASI LGMRHLENLS IRTPDGSSKF KRIMEDGIVL DAIHLKQLNL RLYMPKLPDE QHFPSHLTSI SLDGCCLVED PLPILEKLLE
801: LKEVRLDFRA FCGKRMVSSD GGFPQLHRLY IWGLAEWEEW IVEEGSMPRL HTLTIWNCQK LKQLPDGLRF IYSIKDLDMD KKWKEILSEG GEEYYKVQHI
901: PSVKFEKDYK

Arabidopsis Description

Putative disease resistance protein At1g58400 [Source:UniProtKB/Swiss-Prot;Acc:Q8W3K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.