Factsheet for TraesCS6B01G161400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0267800-01	Rice	cytosol	23.25	51.57
TraesCS7B01G323800.1	Wheat	extracellular	43.67	42.55
TraesCS7B01G324300.1	Wheat	extracellular	43.34	42.23
TraesCS1B01G030900.1	Wheat	cytosol	17.36	38.31
TraesCS6B01G030900.1	Wheat	cytosol	33.3	36.66
TraesCS7B01G345300.1	Wheat	mitochondrion	27.84	36.59
TraesCS2B01G532200.1	Wheat	endoplasmic reticulum	35.7	35.66
TraesCS1B01G023100.1	Wheat	endoplasmic reticulum	34.93	35.16
TraesCS5B01G416800.1	Wheat	cytosol	31.99	35.13
TraesCS6B01G151700.1	Wheat	endoplasmic reticulum	35.48	35.02
TraesCS5B01G301500.1	Wheat	plasma membrane	31.88	34.97
TraesCS3B01G483600.1	Wheat	cytosol	18.56	33.4
TraesCS2B01G058900.1	Wheat	cytosol	33.3	33.37
TraesCS4B01G091600.1	Wheat	cytosol	23.36	32.92
TraesCS1B01G022100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.03	32.92
TraesCS2B01G007600.1	Wheat	mitochondrion	15.5	32.49
TraesCS2B01G225000.1	Wheat	cytosol	29.91	31.64
TraesCS2B01G435600.1	Wheat	cytosol, plastid	31.55	31.28
TraesCS1B01G022200.1	Wheat	cytosol	22.49	31.26
AT3G07040.1	Thale cress	cytosol	31.33	30.99
TraesCS3B01G040100.1	Wheat	cytosol	29.26	30.88
TraesCS1B01G020900.1	Wheat	cytosol	14.08	30.79
TraesCS1B01G021500.1	Wheat	endoplasmic reticulum	23.8	30.36
TraesCS4B01G007500.1	Wheat	cytosol, extracellular	30.46	30.13
TraesCS1B01G081600.1	Wheat	cytosol, golgi, plastid	31.11	30.09
TraesCS1B01G032700.2	Wheat	mitochondrion	20.2	29.94
Solyc08g005440.2.1	Tomato	cytosol, extracellular	30.35	29.86
TraesCS2B01G504900.1	Wheat	cytosol	29.26	29.78
PGSC0003DMT400047578	Potato	plasma membrane	30.68	29.77
TraesCS6B01G153000.1	Wheat	cytosol	30.9	29.73
TraesCS1B01G021900.1	Wheat	cytosol, extracellular	29.04	29.04
TraesCS1B01G020300.1	Wheat	cytosol	30.24	28.94
TraesCS4B01G091900.1	Wheat	endoplasmic reticulum	29.48	28.91
TraesCS1B01G020400.1	Wheat	endoplasmic reticulum	28.38	28.54
TraesCS3B01G483700.1	Wheat	cytosol	28.71	28.4
TraesCS3B01G344500.1	Wheat	cytosol	26.86	27.95
TraesCS1B01G377400.1	Wheat	cytosol	26.53	27.58

Protein Annotations

EnsemblPlants:TraesCS6B01G161400.1	EnsemblPlantsGene:TraesCS6B01G161400	Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR43886	PANTHER:PTHR43886:SF19	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr6B:-:165511610..165514360

Molecular Weight (calculated)

105007.0 Da

IEP (calculated)

7.135

GRAVY (calculated)

-0.194

Length

916 amino acids

Sequence
(BLAST)

001: MAEAVVFYVL EKIGDALAEE GLNLLRSQLG RETSVLPEIK DSMTHLKSQF NITKAFLAEQ QNYSSQGAAY DAWLDEVKNV AHKTEDVIDE FTYLTGQTSR
101: KGSKLMGLFR RSTNLDEWHE IARQLKQIEV TLQKLMSTRE LYGISVGEHK GDNSLGQESY QELWSDSTYF DTEEDIFGNK EEKAKLNHLL MHGPETRNII
201: AICGMGGIGK TTLARGIYKN KEIENAFNCR AWITMSQKYK VEDLLRGILR QVREKNVNIH DQIDTMDRVN LVQTLRSYLQ DKKYLVMLDD MWSRDAWALL
301: NHALPENNIG SRIVITTRIE GVASIVNNDC RIEPKRLPWK DAWDLFCHKA FQRIDGKRCP EFLNHLVEKI IQKCDGLPLA IVVIGSLLNY TNADEKEWNM
401: FYSQLSWHID KNPELNHLKN ILSLSFNSLP GNLKNCFMYC CLFPEDYLIR RKRIIRLWIA EGFVEERGAG TTLEEVAEEY LQELVHRSLL QVVERNQSGR
501: AKGFQMHDIV REITIARCRS ERFSLVAEDP RQTKLGIEAR RVSVLKGAEA VESAAGARQL RSFLLFDEKV NDAWFQKAFA NFRLLTVLSL EGANIEKLPD
601: IVTDLFNLNY LDLKGSKVKE IPKSIGKLRK LQLLNIEGTN VMELPGEIRM LTKLRLLRAG CAVAGEGFIV FRAVRLLSQI YHLNDLQVLG DIVASEGLVD
701: NLGKLTQLRS FGIFVEKIKY LKNICTSIRR MPNLVRFGIV SCIEELVLDL DNFGHVPSLE WLRLRGKLHG GVALPMLFSF TKLTFLSLEW SRLQVDPLPS
801: ISHMSNLGQL SLQRAYDGQL LTFRAGWFPK LKELHLIHME HLNFIEMEAG TMQNLDYVQL IDLRSMITVS HGFQHLTSVQ KLVLADMPEE FIESARGEDW
901: VYIQHIPSVV NIKIEK

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.