Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 5
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P28020_001 | Banana | cytosol | 78.43 | 78.35 |
| GSMUA_Achr6P29800_001 | Banana | cytosol | 32.03 | 33.52 |
| GSMUA_Achr9P12800_001 | Banana | cytosol | 33.44 | 33.26 |
| GSMUA_Achr8P25780_001 | Banana | cytosol | 32.24 | 32.35 |
| GSMUA_Achr5P04240_001 | Banana | cytosol | 30.94 | 32.02 |
| PGSC0003DMT400047578 | Potato | plasma membrane | 30.72 | 29.87 |
| Solyc08g005440.2.1 | Tomato | cytosol, extracellular | 29.52 | 29.11 |
| AT3G07040.1 | Thale cress | cytosol | 29.19 | 28.94 |
| GSMUA_Achr8P30710_001 | Banana | cytosol | 30.07 | 25.6 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P28030_001 | EnsemblPlants:GSMUA_Achr9T28030_001 | EnsemblPlantsGene:GSMUA_Achr9G28030_001 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC |
| InterPro:P-loop_NTPase | ncoils:Coil | PANTHER:PTHR43886 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI000295DD12 | UniProt:M0U460 | MapMan:35.1 | : |
Description
Putative Disease resistance protein RPM1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G28030_001]
Coordinates
chr9:-:32147509..32150340
Molecular Weight (calculated)
104638.0 Da
IEP (calculated)
7.907
GRAVY (calculated)
-0.151
Length
918 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGKYLASLC KILTSAVFQR AITAIRKNQG SSSMDIVYEF DNLTKELRSI QSFLRDMEHS KLDSESLVNW VEEVKEAARD FEVMTEQIVY YAHALVWDKS
101: WSSKAYAYIS SHLPKLKEEL VNNIPQRRDR YLKPSLVRRE EQSCSSGRQM RQPHEELPHE TTCTDVVGME QNEATVIPWL LGETDNSQRN MVISICGMGG
201: LGKTCLAWRI YNSQHVKRHF DCSAWVSISK TYNAEELLRS IIRQIIDKRN LPATPDELDR SSRAALLGLL DQCLHQKRYV IVLDDVWSRN ACNDFSYLLQ
301: NGKIGSRVIV TTRDHHVAAS LSLDSHILNL QPLPESEAWS LFCKKALWTD PNKSCPRDLE IWARRIVAKC DGLPLAILTI GSLMSSQDRS SLTWKHFYLG
401: ISSQLSNNEM LVTMSRSLML GYDDLPYHLK QCYLYCGNVF PESRIIKKNW LLRLWVAEGL VEDKRGMTSE EVAEGYFDEL ILRSMLQVAR KDESGKVKAC
501: RMHILMREVS LCVSKADKLC AVFDEQGVTV DEAKARRISV QISIEKLPAV RHEEKTPLSR LRSLLFFVDD EASAAAFLSR SKYLMLLKVL ELRNVPIDHV
601: PFEVFDLFNL SYLSLRDTKV EVLPKYVERL KILKTLDLRG TKVICLPDEV ARLKELRHLL MDCVYVIKKI KKWRGTISWI HNIEGLLTLK TVEADKRLIA
701: NLAALNQLRS LGLTNVHADD GVLLCDSISK MGHLLSLTID AASDEALMLD SLPSPPPHLR KLVLDGQLWK VPPWFDLLSS LTHLYLLDSQ LEATCNPIPH
801: LEKLESLVHL TLLRAYNGAR LCFRANTFLR LKSLNIAELK CLSQLDMEKD ALPSLSLLHL SRCGDLQGEK LHGIDNLPAL RHLYLQDMPE SLMSSLGGDH
901: RLKASTGWES ISKSMSWL
101: WSSKAYAYIS SHLPKLKEEL VNNIPQRRDR YLKPSLVRRE EQSCSSGRQM RQPHEELPHE TTCTDVVGME QNEATVIPWL LGETDNSQRN MVISICGMGG
201: LGKTCLAWRI YNSQHVKRHF DCSAWVSISK TYNAEELLRS IIRQIIDKRN LPATPDELDR SSRAALLGLL DQCLHQKRYV IVLDDVWSRN ACNDFSYLLQ
301: NGKIGSRVIV TTRDHHVAAS LSLDSHILNL QPLPESEAWS LFCKKALWTD PNKSCPRDLE IWARRIVAKC DGLPLAILTI GSLMSSQDRS SLTWKHFYLG
401: ISSQLSNNEM LVTMSRSLML GYDDLPYHLK QCYLYCGNVF PESRIIKKNW LLRLWVAEGL VEDKRGMTSE EVAEGYFDEL ILRSMLQVAR KDESGKVKAC
501: RMHILMREVS LCVSKADKLC AVFDEQGVTV DEAKARRISV QISIEKLPAV RHEEKTPLSR LRSLLFFVDD EASAAAFLSR SKYLMLLKVL ELRNVPIDHV
601: PFEVFDLFNL SYLSLRDTKV EVLPKYVERL KILKTLDLRG TKVICLPDEV ARLKELRHLL MDCVYVIKKI KKWRGTISWI HNIEGLLTLK TVEADKRLIA
701: NLAALNQLRS LGLTNVHADD GVLLCDSISK MGHLLSLTID AASDEALMLD SLPSPPPHLR KLVLDGQLWK VPPWFDLLSS LTHLYLLDSQ LEATCNPIPH
801: LEKLESLVHL TLLRAYNGAR LCFRANTFLR LKSLNIAELK CLSQLDMEKD ALPSLSLLHL SRCGDLQGEK LHGIDNLPAL RHLYLQDMPE SLMSSLGGDH
901: RLKASTGWES ISKSMSWL
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.