Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400065023 | Potato | cytosol, endoplasmic reticulum | 94.72 | 62.38 |
| Solyc01g086810.2.1 | Tomato | nucleus | 93.92 | 61.15 |
| VIT_05s0020g04930.t01 | Wine grape | cytosol | 43.84 | 51.02 |
| KRH74294 | Soybean | cytosol | 52.32 | 34.57 |
| KRH39626 | Soybean | cytosol | 52.16 | 34.39 |
| KRH74292 | Soybean | cytosol | 49.6 | 33.19 |
| VIT_02s0012g02720.t01 | Wine grape | cytosol, extracellular | 48.8 | 32.76 |
| KRH39629 | Soybean | cytosol | 48.8 | 32.55 |
| GSMUA_Achr8P25780_001 | Banana | cytosol | 40.64 | 27.76 |
| Os08t0424700-00 | Rice | cytosol | 37.28 | 25.69 |
| PGSC0003DMT400094852 | Potato | cytosol | 36.48 | 25.17 |
| PGSC0003DMT400047578 | Potato | plasma membrane | 32.96 | 21.82 |
| PGSC0003DMT400054356 | Potato | extracellular | 31.2 | 21.36 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006950 |
| GO:GO:0006952 | GO:GO:0008150 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | UniProt:M1A777 |
| InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | EnsemblPlantsGene:PGSC0003DMG400006316 | PGSC:PGSC0003DMG400006316 | EnsemblPlants:PGSC0003DMT400016161 |
| PANTHER:PTHR43886 | PANTHER:PTHR43886:SF30 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI000296B431 | SEG:seg |
Description
NBS-LRR type disease resistance protein [Source:PGSC_GENE;Acc:PGSC0003DMG400006316]
Coordinates
chr1:-:66597399..66601144
Molecular Weight (calculated)
72031.3 Da
IEP (calculated)
9.226
GRAVY (calculated)
-0.170
Length
625 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMEVKPLST EESWILFCKK AFHGYSCPSH LESISRNILK KCGGLPLAVV AVGGVLATKN RNNIREWGML NHSLGPELDS NDKFESMRIV LLLSFNDLPY
101: YLKPCFLYLS IYPEDHLIER NTLIYRWIME GFVKQKERGT VEHVADGYLN ELINRSLIHP VQYNDDGSMK LGRIHDLYRE LILSKSRDGN FTATVDEHNK
201: LWPEKTRWLS MHGMLGNLQV KRSVTKLRSL LTFGVADPQS LSCISQVLSS SRMLRVLDLR GAPLNMIPET IFQMFHLRYL SLRNTNVKVL PRSIGRLKQL
301: EILDLKQTYV SELPVEILKL ENLSHLLVYS LVSYSYLPYN SSPGFKAFRG IGALRALQKL ECIEATPGSG ILREVGLLSE LRRLCILKLR KEDGRTVCSS
401: IQKLRKLESL NLKSVEEHEI LDLSYMSSPP PLLQRLYLTG HIVKLPAWIQ DLHSLVKIYF RWTHLTKDPL KYLQDLPNLV HLEFLVRYTG KELYFEQGKF
501: QRLKLLNLDK LEGLKQVTIG EGAVPHLEKL VIQRCALLET VPTGIECLLN LKVLEFFDMP DEFIMTLRPD KQGADAWKVS HIREVFYTYW RDGCWMVHSL
601: KEKEKNQISD QSGAVTRTYG RQNSL
101: YLKPCFLYLS IYPEDHLIER NTLIYRWIME GFVKQKERGT VEHVADGYLN ELINRSLIHP VQYNDDGSMK LGRIHDLYRE LILSKSRDGN FTATVDEHNK
201: LWPEKTRWLS MHGMLGNLQV KRSVTKLRSL LTFGVADPQS LSCISQVLSS SRMLRVLDLR GAPLNMIPET IFQMFHLRYL SLRNTNVKVL PRSIGRLKQL
301: EILDLKQTYV SELPVEILKL ENLSHLLVYS LVSYSYLPYN SSPGFKAFRG IGALRALQKL ECIEATPGSG ILREVGLLSE LRRLCILKLR KEDGRTVCSS
401: IQKLRKLESL NLKSVEEHEI LDLSYMSSPP PLLQRLYLTG HIVKLPAWIQ DLHSLVKIYF RWTHLTKDPL KYLQDLPNLV HLEFLVRYTG KELYFEQGKF
501: QRLKLLNLDK LEGLKQVTIG EGAVPHLEKL VIQRCALLET VPTGIECLLN LKVLEFFDMP DEFIMTLRPD KQGADAWKVS HIREVFYTYW RDGCWMVHSL
601: KEKEKNQISD QSGAVTRTYG RQNSL
001: MVEAIVSFGV EKLWDRLTQE YEQFQGVEDR IAELKSNLNL LKSFLKDAEA KKNTSQMVRH CVEEIKEIVY DTENMIETFI LKEAARKRSG IIRRITKLTC
101: IKVHRWEFAS DIGGISKRIS KVIQDMHSFG VQQMISDGSQ SSHLLQERER EMRQTFSRGY ESDFVGLEVN VKKLVGYLVE EDDIQIVSVT GMGGLGKTTL
201: ARQVFNHEDV KHQFDRLAWV CVSQEFTRKN VWQMILQNLT SRETKDEILQ MEEAELHDEL FQLLETSKSL IVFDDIWKEE DWGLINPIFP PKKETIAMHG
301: NRRYVNFKPE CLTILESWIL FQRIAMPRVD ESEFKVDKEM EMMGKQMIKY CGGLPLAVKV LGGLLAAKYT FHDWKRLSEN IGCHIVGRTD FSDGNNSSVY
401: HVLSLSFEEL PSYLKHCFLY LAHFPEDHNI KVEKLSYCWA AEGILEPRHY HGQTIRDVGE SYIEELVRRN MVIAERDVTT LRFEACHLHD MMREVCLLKA
501: KEENFVQIAS ILPPTANSQY PGTSRRFVSQ NPTTLHVSRD INNPKLQSLL IVWENRRKSW KLLGSSFIRL ELLRVLDLYK AKFEGRNLPS GIGKLIHLRY
601: LNLDLARVSR LPSSLGNLRL LIYLDINVCT KSLFVPNCLM GMHELRYLRL PFNTSKEIKL GLCNLVNLET LENFSTENSS LEDLRGMVSL RTLTIGLFKH
701: ISKETLFASI LGMRHLENLS IRTPDGSSKF KRIMEDGIVL DAIHLKQLNL RLYMPKLPDE QHFPSHLTSI SLDGCCLVED PLPILEKLLE LKEVRLDFRA
801: FCGKRMVSSD GGFPQLHRLY IWGLAEWEEW IVEEGSMPRL HTLTIWNCQK LKQLPDGLRF IYSIKDLDMD KKWKEILSEG GEEYYKVQHI PSVKFEKDYK
101: IKVHRWEFAS DIGGISKRIS KVIQDMHSFG VQQMISDGSQ SSHLLQERER EMRQTFSRGY ESDFVGLEVN VKKLVGYLVE EDDIQIVSVT GMGGLGKTTL
201: ARQVFNHEDV KHQFDRLAWV CVSQEFTRKN VWQMILQNLT SRETKDEILQ MEEAELHDEL FQLLETSKSL IVFDDIWKEE DWGLINPIFP PKKETIAMHG
301: NRRYVNFKPE CLTILESWIL FQRIAMPRVD ESEFKVDKEM EMMGKQMIKY CGGLPLAVKV LGGLLAAKYT FHDWKRLSEN IGCHIVGRTD FSDGNNSSVY
401: HVLSLSFEEL PSYLKHCFLY LAHFPEDHNI KVEKLSYCWA AEGILEPRHY HGQTIRDVGE SYIEELVRRN MVIAERDVTT LRFEACHLHD MMREVCLLKA
501: KEENFVQIAS ILPPTANSQY PGTSRRFVSQ NPTTLHVSRD INNPKLQSLL IVWENRRKSW KLLGSSFIRL ELLRVLDLYK AKFEGRNLPS GIGKLIHLRY
601: LNLDLARVSR LPSSLGNLRL LIYLDINVCT KSLFVPNCLM GMHELRYLRL PFNTSKEIKL GLCNLVNLET LENFSTENSS LEDLRGMVSL RTLTIGLFKH
701: ISKETLFASI LGMRHLENLS IRTPDGSSKF KRIMEDGIVL DAIHLKQLNL RLYMPKLPDE QHFPSHLTSI SLDGCCLVED PLPILEKLLE LKEVRLDFRA
801: FCGKRMVSSD GGFPQLHRLY IWGLAEWEEW IVEEGSMPRL HTLTIWNCQK LKQLPDGLRF IYSIKDLDMD KKWKEILSEG GEEYYKVQHI PSVKFEKDYK
Arabidopsis Description
Putative disease resistance protein At1g58400 [Source:UniProtKB/Swiss-Prot;Acc:Q8W3K3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.