Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g010160.1.1 | Tomato | cytosol | 92.05 | 91.95 |
| VIT_05s0020g04930.t01 | Wine grape | cytosol | 24.83 | 41.9 |
| VIT_02s0012g02720.t01 | Wine grape | cytosol, extracellular | 38.63 | 37.59 |
| KRH39629 | Soybean | cytosol | 38.08 | 36.82 |
| PGSC0003DMT400016161 | Potato | cytosol | 25.17 | 36.48 |
| KRH74292 | Soybean | cytosol | 37.53 | 36.4 |
| KRH74294 | Soybean | cytosol | 37.42 | 35.84 |
| KRH39626 | Soybean | cytosol | 37.42 | 35.76 |
| PGSC0003DMT400065023 | Potato | cytosol, endoplasmic reticulum | 37.09 | 35.41 |
| GSMUA_Achr8P25780_001 | Banana | cytosol | 33.44 | 33.11 |
| PGSC0003DMT400054356 | Potato | extracellular | 29.14 | 28.92 |
| Os08t0424700-00 | Rice | cytosol | 28.81 | 28.78 |
| PGSC0003DMT400047578 | Potato | plasma membrane | 27.7 | 26.59 |
Protein Annotations
| EntrezGene:102585282 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0043531 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | UniProt:M1DV09 |
| InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PFAM:PF13855 | EnsemblPlantsGene:PGSC0003DMG400044423 | PGSC:PGSC0003DMG400044423 |
| EnsemblPlants:PGSC0003DMT400094852 | PRINTS:PR00364 | PANTHER:PTHR43886 | PANTHER:PTHR43886:SF17 | InterPro:RX-like_CC | SMART:SM00369 |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI000294A20D | RefSeq:XP_006353282.1 | SEG:seg | : |
Description
NBS-LRR type disease resistance protein [Source:PGSC_GENE;Acc:PGSC0003DMG400044423]
Coordinates
chr11:-:2710623..2713343
Molecular Weight (calculated)
103976.0 Da
IEP (calculated)
7.495
GRAVY (calculated)
-0.119
Length
906 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESAVTFLV HQLSALLHPG KKFLQNFQVE ILYIRDAFEK MKAFSRVADA NEDEEDDELQ LWIKQVQDLA HDVQDILEKH VVTCSNFQEK GSWTWKKPHH
101: HSLMYEKKFE VQNDNLSMLL EGIKARVIVI SAGHKTFLQK YGVITGDTLC NSSHEDVPLD DDADLVGVEV YKSVLLDWLL SDDPEWKLYC VIGARGIGKT
201: TLVKKVYDDA SVKKHFNCII WIEVSRFSTV KEILRSIITP ENDQSRRAFD AMESDMLAKF IQDVLESSRY FVVLDDVPGV RSWRALKGLF PIENCGSRVI
301: ITSRNADIHT ICLEPGCHSR FYKMNPMSEE ESWILFCRKA FSGSLLCPPS LVQVSKDIIE KCNGLPMAIL VIAGALATKW NRTEAWEMFY NSLVDKLQGS
401: YSKDEHMERL LNLCYQDLPF YLKSCFTYLS IFPKYYVIDK VRLIRLLVAQ GFVLEREDKA IAQVADSYLN ELANRSLIQV AERYSNGRLD SFTIHNLWYE
501: IILSKSPERV TTTTANGEET TRKPHKIRHL VIHDQLANDI QDIDQFKHLH SLITLGSSDS VSNSFLQKLL SGSFKLLKVL DLTEAPLTKI PEGVFELFHL
601: KFLNLRSTKI KHLPGSIGKL ESLEFLDLRD TLVEKLPVEI LNLQYLCHIF VYRRGAGFFH GFKAPKKIGT LVSLEAVNLI NATTTTVIEL GKLTRLRMLF
701: IARLRRKHGR DLCSSLDKLI NLQQLTISSY GVSDIIDLHY PLSSTHSSLR TLIFEGCLER FPQWMTTLHA LTTVTLKWSK LMDNALDILQ DLPNLMNLML
801: DLAYEGEELR FRAGGFKKLN KLCIWNSTKL RQMKVEKGAM PFLEELQLRN CRLMEELPFG IEHLSKLQYL SLEKISKKLS VTVQLKSSQS GDYWKIAHVP
901: RVYVED
101: HSLMYEKKFE VQNDNLSMLL EGIKARVIVI SAGHKTFLQK YGVITGDTLC NSSHEDVPLD DDADLVGVEV YKSVLLDWLL SDDPEWKLYC VIGARGIGKT
201: TLVKKVYDDA SVKKHFNCII WIEVSRFSTV KEILRSIITP ENDQSRRAFD AMESDMLAKF IQDVLESSRY FVVLDDVPGV RSWRALKGLF PIENCGSRVI
301: ITSRNADIHT ICLEPGCHSR FYKMNPMSEE ESWILFCRKA FSGSLLCPPS LVQVSKDIIE KCNGLPMAIL VIAGALATKW NRTEAWEMFY NSLVDKLQGS
401: YSKDEHMERL LNLCYQDLPF YLKSCFTYLS IFPKYYVIDK VRLIRLLVAQ GFVLEREDKA IAQVADSYLN ELANRSLIQV AERYSNGRLD SFTIHNLWYE
501: IILSKSPERV TTTTANGEET TRKPHKIRHL VIHDQLANDI QDIDQFKHLH SLITLGSSDS VSNSFLQKLL SGSFKLLKVL DLTEAPLTKI PEGVFELFHL
601: KFLNLRSTKI KHLPGSIGKL ESLEFLDLRD TLVEKLPVEI LNLQYLCHIF VYRRGAGFFH GFKAPKKIGT LVSLEAVNLI NATTTTVIEL GKLTRLRMLF
701: IARLRRKHGR DLCSSLDKLI NLQQLTISSY GVSDIIDLHY PLSSTHSSLR TLIFEGCLER FPQWMTTLHA LTTVTLKWSK LMDNALDILQ DLPNLMNLML
801: DLAYEGEELR FRAGGFKKLN KLCIWNSTKL RQMKVEKGAM PFLEELQLRN CRLMEELPFG IEHLSKLQYL SLEKISKKLS VTVQLKSSQS GDYWKIAHVP
901: RVYVED
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.