Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
25464976
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400065023 | Potato | cytosol, endoplasmic reticulum | 95.1 | 96.21 |
| PGSC0003DMT400016161 | Potato | cytosol | 61.15 | 93.92 |
| VIT_02s0012g02720.t01 | Wine grape | cytosol, extracellular | 50.52 | 52.09 |
| KRH74294 | Soybean | cytosol | 50.21 | 50.95 |
| KRH39626 | Soybean | cytosol | 50.1 | 50.74 |
| VIT_05s0020g04930.t01 | Wine grape | cytosol | 28.02 | 50.09 |
| KRH74292 | Soybean | cytosol | 47.08 | 48.39 |
| KRH39629 | Soybean | cytosol | 46.67 | 47.81 |
| GSMUA_Achr8P25780_001 | Banana | cytosol | 41.25 | 43.28 |
| Solyc11g010160.1.1 | Tomato | cytosol | 35.42 | 37.49 |
| Os08t0424700-00 | Rice | cytosol | 33.23 | 35.17 |
| Solyc08g005440.2.1 | Tomato | cytosol, extracellular | 32.5 | 33.51 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043531 |
| InterPro:IPR001611 | InterPro:IPR032675 | UniProt:K4AY74 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:NB-ARC |
| InterPro:P-loop_NTPase | PFAM:PF00931 | PFAM:PF13855 | PRINTS:PR00364 | PANTHER:PTHR43886 | PANTHER:PTHR43886:SF30 |
| InterPro:RX-like_CC | SUPFAM:SSF52058 | SUPFAM:SSF52540 | EnsemblPlantsGene:Solyc01g086810.2 | EnsemblPlants:Solyc01g086810.2.1 | UniParc:UPI0002762D7A |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:81751980..81755162
Molecular Weight (calculated)
110154.0 Da
IEP (calculated)
7.338
GRAVY (calculated)
-0.144
Length
960 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIDTCEDQV EMADCAVVFI LDKLTNLLAE EAILLQGVKH DIQYIKDELE RMIAFLGVAD AFEEGDAEVK VWVRQVRDVA NDIEDVLDES MLLSYDHHYR
101: GSCCFIAKLV FSIRNIKFRH KLVVEIQAIK SRVDNIAMGH QRYRYKLYVP EQGSNSNHAY DAANDRRGDA LLLEEAELVG IENPTQQLIG WLVEDDPRLK
201: VVSVVGMGGS GKTTLVKKVY EDATVKKNFN SLAWITVSKS FKVEEVLKDM IQQLYDEVKQ PAPEGLNTMS SNRLKTIAKV FLQSRTYVLV FDDVWSIQAW
301: EAIRYALPDV NDGSRVILTT RLLDVASFCS IETNGYVYEV KPLSTEESWI LFCQKAFHGF SCPSHLESIS RNILKKCGGL PLAIVAVGGV LATKNRNNIR
401: EWGMLNHSLG PELDCNDKFE SMRIVLLLSF NDLPYYLKPC FLYLSIYPED YLIERNTLIY RWITEGFVKQ KERRTVEDVA DGYLNELINR SLIHPVQYND
501: DGSMKLGRIH DLYRELILSK SRDDNFTATV DEHNKLWPEK TRRLSMHGML GNLQVKRSVT KLRSLLTFGV ADPQSLSCIS QVLGSSRMLR VLDLRGAPLK
601: MIPETVFQLF HLRYLSLRNT NVKVLPRSIG RLKQLEILDL KQTHVTELPV EILKLENLRH LLVYSHVSYS YLPYNCSPGF KAFRGIGALR ALQKLVYIEA
701: TPGSGILREV GMLGELRRLC ILKLRKEDGR TVCSSIQKLR KLESLNLKSV EEHEILDLSY MASPPPLLQR LYLTGHIVKL PAWIQDLNSL VKIYFRWTHL
801: SEDPLKYLQD LPNLVHLEFL VGYTGRELYF EQGKFQRLKL LNFDMLEGLR QVTIGEGAVP HLEKLVIQRC ALLETVPTGI ECLLNLKVLE FFDMPDEFIM
901: TLRPDKLGAD AWKVSHIREV FYTYWRDGCW MVHSLKEKEN NHISDPSGAV TRTYGRRNSL
101: GSCCFIAKLV FSIRNIKFRH KLVVEIQAIK SRVDNIAMGH QRYRYKLYVP EQGSNSNHAY DAANDRRGDA LLLEEAELVG IENPTQQLIG WLVEDDPRLK
201: VVSVVGMGGS GKTTLVKKVY EDATVKKNFN SLAWITVSKS FKVEEVLKDM IQQLYDEVKQ PAPEGLNTMS SNRLKTIAKV FLQSRTYVLV FDDVWSIQAW
301: EAIRYALPDV NDGSRVILTT RLLDVASFCS IETNGYVYEV KPLSTEESWI LFCQKAFHGF SCPSHLESIS RNILKKCGGL PLAIVAVGGV LATKNRNNIR
401: EWGMLNHSLG PELDCNDKFE SMRIVLLLSF NDLPYYLKPC FLYLSIYPED YLIERNTLIY RWITEGFVKQ KERRTVEDVA DGYLNELINR SLIHPVQYND
501: DGSMKLGRIH DLYRELILSK SRDDNFTATV DEHNKLWPEK TRRLSMHGML GNLQVKRSVT KLRSLLTFGV ADPQSLSCIS QVLGSSRMLR VLDLRGAPLK
601: MIPETVFQLF HLRYLSLRNT NVKVLPRSIG RLKQLEILDL KQTHVTELPV EILKLENLRH LLVYSHVSYS YLPYNCSPGF KAFRGIGALR ALQKLVYIEA
701: TPGSGILREV GMLGELRRLC ILKLRKEDGR TVCSSIQKLR KLESLNLKSV EEHEILDLSY MASPPPLLQR LYLTGHIVKL PAWIQDLNSL VKIYFRWTHL
801: SEDPLKYLQD LPNLVHLEFL VGYTGRELYF EQGKFQRLKL LNFDMLEGLR QVTIGEGAVP HLEKLVIQRC ALLETVPTGI ECLLNLKVLE FFDMPDEFIM
901: TLRPDKLGAD AWKVSHIREV FYTYWRDGCW MVHSLKEKEN NHISDPSGAV TRTYGRRNSL
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.