Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0011g01020.t01 | Wine grape | cytosol | 47.21 | 82.57 |
| VIT_01s0011g00950.t01 | Wine grape | cytosol, nucleus, peroxisome | 42.01 | 73.97 |
| VIT_01s0011g00960.t01 | Wine grape | nucleus | 40.42 | 73.13 |
| VIT_01s0011g00990.t01 | Wine grape | cytosol | 36.04 | 71.54 |
| VIT_01s0011g00970.t01 | Wine grape | cytosol | 38.83 | 71.33 |
| VIT_05s0020g04930.t01 | Wine grape | cytosol | 14.85 | 43.58 |
| VIT_07s0005g06240.t01 | Wine grape | cytosol | 12.88 | 40.44 |
| GSMUA_Achr8P25780_001 | Banana | cytosol | 23.1 | 39.78 |
| VIT_06s0009g01350.t01 | Wine grape | cytosol | 15.67 | 39.33 |
| VIT_07s0005g06180.t01 | Wine grape | cytosol | 22.46 | 38.52 |
| VIT_07s0005g06210.t01 | Wine grape | cytosol | 22.27 | 37.58 |
| VIT_02s0012g02720.t01 | Wine grape | cytosol, extracellular | 22.08 | 37.38 |
| VIT_07s0005g06220.t01 | Wine grape | cytosol | 21.7 | 37.01 |
| VIT_07s0005g06200.t01 | Wine grape | cytosol, plasma membrane | 19.99 | 35.2 |
| Os08t0424700-00 | Rice | cytosol | 20.05 | 34.84 |
| VIT_00s0515g00020.t01 | Wine grape | cytosol | 17.51 | 32.55 |
| VIT_06s0009g01360.t01 | Wine grape | cytosol | 19.04 | 27.83 |
Protein Annotations
| EntrezGene:100266343 | wikigene:100266343 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ProteinID:CCB51045 |
| ProteinID:CCB51045.1 | ncoils:Coil | UniProt:F6HEY5 | EMBL:FN595752 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043531 |
| InterPro:IPR032675 | EntrezGene:LOC100266343 | wikigene:LOC100266343 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_typical-subtyp | InterPro:NB-ARC |
| InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43886 | PANTHER:PTHR43886:SF14 | InterPro:RX-like_CC |
| SMART:SM00369 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI0002107F44 | ArrayExpress:VIT_01s0011g01000 | EnsemblPlantsGene:VIT_01s0011g01000 |
| EnsemblPlants:VIT_01s0011g01000.t01 | RefSeq:XP_002275269 | RefSeq:XP_002275269.2 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1:+:872585..888273
Molecular Weight (calculated)
180693.0 Da
IEP (calculated)
9.191
GRAVY (calculated)
-0.293
Length
1576 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADGAVSFLL QNLEAFATRE WNLQEHIRNG VHNLKRELRS IEALMRDADA KKEHDHQFKV WIQEVRTEAY AIEDVLDLFR LHRDQESVWS HLKMRHSIGN
0101: LIQDINTRLV IIKQTKERYQ IMVSTSISAE TNAYLNVRVA PLIIGRGDNI LGIDEPKRKL VSWALESNQK LKVMFVVGMA GLGKTTLARS VYEMVKEHFD
0201: CHAWIIASKS KTKPETLRSL LEHLGCSTEG SNIVILMHRL QNFLQPKRYV IVVDDLWVKD VWESIRLALP DGNNNRIIIT TRRGDIANSC RDDDSIDIHK
0301: VQPLSPQWAE QLFYKKAFSR NGRCPSGLEE VSKSILQKCD GLPLGIIEIG KLLWGKRQST YEWKKLDDSL ESELRSGGGL SDIMRVLSAS YNDLPYHLKY
0401: CFLYMSIFPE NNPVKRRRLI RLWIAEGFVT EERGKTLEEV GEEYLNELIG RSLIKANEMD FDERPITVGV HSLMHRIILS VSQVENFCTV CAGPEGNLAD
0501: KPRRLSIQTG NFDVSQDLTC VRTFFSFSTG RVNIGSNFKL LKVLDIQSTP LENFPSAITD LLLLRYLSLR NTNIRSIPKS LRNLRHLETL DLKQTLVKEL
0601: PKAVLQLDKL RHLLVYAYNM GSVVEFDAVQ GFTVPRKIGA MKNLQKLSFV KAKRHNRMIQ ELKNLTKLRK LGIVELAKED GNSLCHSIEK MPDLLSLDVT
0701: SLSKGEPLEL DAMTNPPRLL QRLYLKGHLQ RFPKWVSSLH DLVRIRLKWS LLSQDNPIEA LQDLPNLMEL QLLDAYTGTQ LDFNSGKFQK LKILDLEQLK
0801: QLRFIIMEDD TLPCLQKLII RQCNELEHVP VGIDGLHHLN ELHLCDMPEK FVALLKKRGG ELRHLLHRIL RILSYQQGHN LPISEKRERE IMVDPEITGG
0901: IAASTLSFLL VKLDAFAIRE WKLQENIKKS VQNLGCELRN IQAMLRDADS KEEHSHQFTV WIKEVRDQAY AIEDALDLFK LKQESVWRRL KLRHSINDLI
1001: QDIERSLQNI QRTKERYRSM ASYSTNAGNN TYLHVRVAPL FIGNVDTVGI EEPTNKLVSW ALEPKQRLEV MFVVGMAGLG KTTLVHSVYE SVKQNFDCHI
1101: WITASKSKTK LDILRTLLVE KFGCTITQGG DVVALTHKLR KFLHNKRYVI VLDDLWVKDV WESIRLALPN GKDSRIIITT RRGDIANSWR DDDSVDIHML
1201: QPLSPERAEK LFYKKAFSRN GRCPSGLEEV SKSILQKCDG LPLGIIEIGR LLSIKAPTKN EWKILHDSLE SELRGSGGLS NITKVLSASY NDLPFHLKYC
1301: FLYMSIFPET SPVKRRRLIR LWIAEGFVIE KGGKTSEEVG EEYLNELIDR SLIKVNEMDF EGRPKSVGVH SLMLKMILSV SREENFCSVC TGSERNLSEK
1401: TRRLSIQKED FDVSQDLPCV RTFFSFGIGK VKIGSNFKLL KVLDIQGTPL EEFPGVIKDL LLLRYLSLRN TNIRSIPGTL GDLHHLETLD LKQTLVTKVP
1501: KAVLQLEKLR HLLVYRTKED RRIEEPTKAV ICKGEWAAQN ESGAQNDTRA RQSYAVEEAG HCRTSKRTWG ELVPLN
0101: LIQDINTRLV IIKQTKERYQ IMVSTSISAE TNAYLNVRVA PLIIGRGDNI LGIDEPKRKL VSWALESNQK LKVMFVVGMA GLGKTTLARS VYEMVKEHFD
0201: CHAWIIASKS KTKPETLRSL LEHLGCSTEG SNIVILMHRL QNFLQPKRYV IVVDDLWVKD VWESIRLALP DGNNNRIIIT TRRGDIANSC RDDDSIDIHK
0301: VQPLSPQWAE QLFYKKAFSR NGRCPSGLEE VSKSILQKCD GLPLGIIEIG KLLWGKRQST YEWKKLDDSL ESELRSGGGL SDIMRVLSAS YNDLPYHLKY
0401: CFLYMSIFPE NNPVKRRRLI RLWIAEGFVT EERGKTLEEV GEEYLNELIG RSLIKANEMD FDERPITVGV HSLMHRIILS VSQVENFCTV CAGPEGNLAD
0501: KPRRLSIQTG NFDVSQDLTC VRTFFSFSTG RVNIGSNFKL LKVLDIQSTP LENFPSAITD LLLLRYLSLR NTNIRSIPKS LRNLRHLETL DLKQTLVKEL
0601: PKAVLQLDKL RHLLVYAYNM GSVVEFDAVQ GFTVPRKIGA MKNLQKLSFV KAKRHNRMIQ ELKNLTKLRK LGIVELAKED GNSLCHSIEK MPDLLSLDVT
0701: SLSKGEPLEL DAMTNPPRLL QRLYLKGHLQ RFPKWVSSLH DLVRIRLKWS LLSQDNPIEA LQDLPNLMEL QLLDAYTGTQ LDFNSGKFQK LKILDLEQLK
0801: QLRFIIMEDD TLPCLQKLII RQCNELEHVP VGIDGLHHLN ELHLCDMPEK FVALLKKRGG ELRHLLHRIL RILSYQQGHN LPISEKRERE IMVDPEITGG
0901: IAASTLSFLL VKLDAFAIRE WKLQENIKKS VQNLGCELRN IQAMLRDADS KEEHSHQFTV WIKEVRDQAY AIEDALDLFK LKQESVWRRL KLRHSINDLI
1001: QDIERSLQNI QRTKERYRSM ASYSTNAGNN TYLHVRVAPL FIGNVDTVGI EEPTNKLVSW ALEPKQRLEV MFVVGMAGLG KTTLVHSVYE SVKQNFDCHI
1101: WITASKSKTK LDILRTLLVE KFGCTITQGG DVVALTHKLR KFLHNKRYVI VLDDLWVKDV WESIRLALPN GKDSRIIITT RRGDIANSWR DDDSVDIHML
1201: QPLSPERAEK LFYKKAFSRN GRCPSGLEEV SKSILQKCDG LPLGIIEIGR LLSIKAPTKN EWKILHDSLE SELRGSGGLS NITKVLSASY NDLPFHLKYC
1301: FLYMSIFPET SPVKRRRLIR LWIAEGFVIE KGGKTSEEVG EEYLNELIDR SLIKVNEMDF EGRPKSVGVH SLMLKMILSV SREENFCSVC TGSERNLSEK
1401: TRRLSIQKED FDVSQDLPCV RTFFSFGIGK VKIGSNFKLL KVLDIQGTPL EEFPGVIKDL LLLRYLSLRN TNIRSIPGTL GDLHHLETLD LKQTLVTKVP
1501: KAVLQLEKLR HLLVYRTKED RRIEEPTKAV ICKGEWAAQN ESGAQNDTRA RQSYAVEEAG HCRTSKRTWG ELVPLN
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.