Factsheet for VIT_07s0005g06220.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g06180.t01	Wine grape	cytosol	85.17	85.64
VIT_07s0005g06210.t01	Wine grape	cytosol	74.03	73.23
VIT_07s0005g06240.t01	Wine grape	cytosol	38.2	70.32
VIT_07s0005g06200.t01	Wine grape	cytosol, plasma membrane	65.69	67.82
VIT_06s0009g01350.t01	Wine grape	cytosol	42.64	62.74
VIT_05s0020g04930.t01	Wine grape	cytosol	25.97	44.69
KRH56221	Soybean	cytosol	43.29	44.59
VIT_06s0009g01360.t01	Wine grape	cytosol	51.84	44.43
KRH56223	Soybean	cytosol	44.81	43.9
KRH56222	Soybean	cytosol	44.26	43.33
KRG89708	Soybean	cytosol	43.29	42.92
KRH45994	Soybean	cytosol	43.51	42.49
KRG89705	Soybean	cytosol	42.42	42.33
KRH56303	Soybean	cytosol	35.17	41.99
KRG98889	Soybean	cytosol	36.69	41.65
KRG98590	Soybean	cytosol	32.36	41.64
KRG98610	Soybean	cytosol	26.84	41.47
VIT_02s0012g02720.t01	Wine grape	cytosol, extracellular	41.56	41.25
KRH11715	Soybean	cytosol, endoplasmic reticulum, plasma membrane	32.03	41.23
KRG98584	Soybean	cytosol	31.6	40.67
KRG98599	Soybean	cytosol	21.64	40.57
KRG98641	Soybean	cytosol	35.5	40.1
KRG98656	Soybean	cytosol	19.59	40.04
KRG98654	Soybean	peroxisome	39.29	39.76
KRG98644	Soybean	endoplasmic reticulum	12.34	39.72
KRG98585	Soybean	cytosol	39.39	39.61
KRG98645	Soybean	cytosol	28.14	39.57
KRG98586	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.5	39.5
KRG98651	Soybean	cytosol	34.09	39.47
KRG98595	Soybean	cytosol	39.29	39.46
KRH46220	Soybean	cytosol	38.53	39.42
KRG98637	Soybean	cytosol	39.29	39.41
KRG98640	Soybean	cytosol	37.01	39.4
KRH62703	Soybean	cytosol	27.71	39.32
KRG98583	Soybean	nucleus	39.07	39.28
KRG98648	Soybean	cytosol	38.1	39.24
KRG98649	Soybean	cytosol	38.31	39.07
KRH46266	Soybean	cytosol	38.1	38.85
KRG98600	Soybean	cytosol, peroxisome	23.81	38.66
KRG98602	Soybean	cytosol	38.42	38.59
KRH00079	Soybean	nucleus	37.66	38.58
KRH46198	Soybean	cytosol	36.04	38.54
KRH46192	Soybean	cytosol	37.55	38.43
VIT_01s0011g00960.t01	Wine grape	nucleus	36.04	38.23
KRG98719	Soybean	cytosol	37.23	38.1
KRG98721	Soybean	cytosol	37.34	37.83
VIT_01s0011g00970.t01	Wine grape	cytosol	34.96	37.65
KRH76365	Soybean	cytosol	28.46	37.57
KRG98720	Soybean	cytosol, plasma membrane	36.9	37.56
VIT_01s0011g00950.t01	Wine grape	cytosol, nucleus, peroxisome	36.26	37.43
KRG98659	Soybean	cytosol	15.26	37.3
VIT_01s0011g01020.t01	Wine grape	cytosol	36.15	37.07
KRH46576	Soybean	cytosol	25.97	37.04
VIT_01s0011g00990.t01	Wine grape	cytosol	31.71	36.9
KRG98632	Soybean	cytosol	30.41	36.64
KRG98635	Soybean	cytosol	14.39	35.85
Os04t0219600-01	Rice	cytosol	25.97	34.24
VIT_00s0515g00020.t01	Wine grape	cytosol	31.28	34.08
KRG98604	Soybean	cytosol	11.04	33.01
KRG98589	Soybean	mitochondrion	6.17	32.57
KRG98700	Soybean	cytosol	6.6	28.77
Os04t0219550-00	Rice	cytosol	1.84	22.67
VIT_01s0011g01000.t01	Wine grape	nucleus	37.01	21.7

Protein Annotations

Gene3D:1.10.8.430	EntrezGene:100852949	wikigene:100852949	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1
ProteinID:CCB60270	ProteinID:CCB60270.1	UniProt:F6I004	EMBL:FN596502	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531
InterPro:IPR032675	EntrezGene:LOC100852949	wikigene:LOC100852949	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF14	InterPro:RX-like_CC	SUPFAM:SSF52058
SUPFAM:SSF52540	UniParc:UPI000210A2D3	ArrayExpress:VIT_07s0005g06220	EnsemblPlantsGene:VIT_07s0005g06220	EnsemblPlants:VIT_07s0005g06220.t01	RefSeq:XP_003632405
RefSeq:XP_003632405.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7:-:11136318..11139614

Molecular Weight (calculated)

104708.0 Da

IEP (calculated)

8.361

GRAVY (calculated)

-0.127

Length

924 amino acids

Sequence
(BLAST)

001: MAEIAVNIVI DKLLPLLDQE ARLLGGVHTQ VEDIKTELLY IQAFLMDADA KGEKADVSQG LKTWIQDLRE TAYSIEDVID EYLLHLGNPS QRHRFIGFLC
101: KVGRLIKKLK RRHEVASKIR DIQKKVVKLK ETSSTYGFIS SVQPGSGGRS TSAPWHDPRV TSLFIDDAEI VGIESQNRKL TSRLVEGTPK RTVISVVGMG
201: GLGKTTLAKK VYDNKELVGY FDCSAWITVS QSFKMEELLR NMSKKFYQSR KEAVPEGLDT TDEMSLITLT RGYLQDKRYV VVFDDVWKLD FWGIIKCVLP
301: ENGKGSRIII TTRNDEVASS CIESSFDYIH KLQPLSPKSS WELFCKKTFQ GGCPPDLEKL SLDIVKRCGG LPLAIVAVGG LLSRKEKLIP EWKKFSDNLR
401: SEFQSNSHLE SINTILSLSY HDLPYYLKSC FLYLAIFPED YTIRCGPLTR LWIAEGFVKA KKDVMLEDVA EEFLTELIHR NLVQVSDVYA DGKIESCHIH
501: DLIREIILKK AAELSFCCLM TGEASSFDGG FRHLSVHNSS YNVVNIIGKK SHIRSIFLYN SQMFFLEKLA SRFNLLKVLD LNDSGLDSFP ENLGNLLHLR
601: YLSLRNTKVR MLPRSIGKLQ NLQTLDLKYS LVEDLPVEIN RLKKLRNILA QNYDFDGDLG MFSVKGVQVK EGIGCLEELQ KLSCVEANHG VGVIKELGKL
701: RQLRKLSITK LTRENGKHLF ASITNMNRLE SLSISSLSEE EILDLQHVSY PPSCLTRLKL IGPLEKLPDW ISELQNLSIV ILYGSNLMND PVKVLQALPN
801: LQMLQLMRAS AVEELCFEAT GFQKLKRLVV LYLVGVKRVK IENGALPLLE TLLVGPCPQL EELPPGIRHL TRLTTLEFYN LQEELKLSMI PSRGRNYKIV
901: EHIPNVFFYG NGTQSLRELS DYKS

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.