CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89705	Soybean	cytosol	72.53	73.0
KRG98889	Soybean	cytosol	59.66	68.3
KRH45994	Soybean	cytosol	69.31	68.29
KRH11715	Soybean	cytosol, endoplasmic reticulum, plasma membrane	50.97	66.16
KRG98590	Soybean	cytosol	40.56	52.65
KRG98641	Soybean	cytosol	46.03	52.45
KRG98583	Soybean	nucleus	51.5	52.23
KRG98651	Soybean	cytosol	44.64	52.13
KRG98656	Soybean	cytosol	25.11	51.77
KRG98649	Soybean	cytosol	50.32	51.77
KRG98585	Soybean	cytosol	50.86	51.58
KRG98586	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	50.86	51.3
KRG98654	Soybean	peroxisome	50.11	51.15
KRG98595	Soybean	cytosol	50.21	50.87
KRG98648	Soybean	cytosol	48.82	50.72
KRG98584	Soybean	cytosol	39.06	50.7
KRG98640	Soybean	cytosol	47.1	50.58
KRG98602	Soybean	cytosol	49.89	50.54
KRG98632	Soybean	cytosol	41.42	50.33
KRG98610	Soybean	cytosol	32.19	50.17
KRG98637	Soybean	cytosol	49.46	50.05
KRG98645	Soybean	cytosol	35.19	49.92
KRG98600	Soybean	cytosol, peroxisome	30.26	49.56
KRG98601	Soybean	cytosol	19.96	49.21
KRG98599	Soybean	cytosol	25.75	48.68
KRH46576	Soybean	cytosol	33.8	48.61
KRG98719	Soybean	cytosol	47.0	48.51
KRG98720	Soybean	cytosol, plasma membrane	47.1	48.35
KRG98659	Soybean	cytosol	19.53	48.15
KRH46266	Soybean	cytosol	46.78	48.12
KRH46220	Soybean	cytosol	46.57	48.06
KRG98721	Soybean	cytosol	47.0	48.03
KRG98589	Soybean	mitochondrion	9.01	48.0
KRH46198	Soybean	cytosol	44.42	47.92
KRH56223	Soybean	cytosol	48.39	47.83
KRH00079	Soybean	nucleus	46.03	47.56
KRH56303	Soybean	cytosol	39.48	47.55
KRH46192	Soybean	cytosol	46.03	47.51
KRG98635	Soybean	cytosol	18.88	47.44
KRG98644	Soybean	endoplasmic reticulum	14.59	47.39
KRH56221	Soybean	cytosol	45.28	47.05
KRH56222	Soybean	cytosol	47.21	46.61
VIT_06s0009g01350.t01	Wine grape	cytosol	31.33	46.5
KRG98604	Soybean	cytosol	14.91	44.98
VIT_07s0005g06180.t01	Wine grape	cytosol	43.99	44.61
KRH76365	Soybean	cytosol	32.94	43.86
VIT_07s0005g06220.t01	Wine grape	cytosol	42.92	43.29
VIT_07s0005g06240.t01	Wine grape	cytosol	23.28	43.23
KRG98700	Soybean	cytosol	9.76	42.92
VIT_07s0005g06210.t01	Wine grape	cytosol	42.92	42.83
VIT_07s0005g06200.t01	Wine grape	cytosol, plasma membrane	38.41	40.0
KRH62703	Soybean	cytosol	27.79	39.78
KRH74292	Soybean	cytosol	36.37	36.3
KRH39626	Soybean	cytosol	36.7	36.08
KRH74294	Soybean	cytosol	36.59	36.05
KRH39629	Soybean	cytosol	35.94	35.75
VIT_06s0009g01360.t01	Wine grape	cytosol	37.34	32.28
Os04t0219600-01	Rice	cytosol	24.03	31.95
Os04t0219550-00	Rice	cytosol	2.15	26.67

Protein Annotations

Gene3D:1.10.8.430	EntrezGene:100789363	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02012262
EnsemblPlantsGene:GLYMA_20G042700	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0043531	UniProt:I1NDY1	InterPro:IPR032675	EnsemblPlants:KRG89708
ProteinID:KRG89708	ProteinID:KRG89708.1	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931
PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF14	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540
UniParc:UPI000233DBBB	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:7689320..7693244

Molecular Weight (calculated)

106601.0 Da

IEP (calculated)

8.361

GRAVY (calculated)

-0.326

Length

932 amino acids

Sequence
(BLAST)

001: MAEIAVSSAL DKLLPLIADE ANLLRGISKE FADIKKELEY IQAFLKDADR KAAAEGDNTD DRIKIWVKEL REASFSIEDV IDEYMILVEQ QPRDPGCATS
101: LCKVIHFIKT LMPRRQIASK IKQAKSSVHG IKQRGVDYHF LIHSSLQLGP SRYRGSHNNV QWHDPRMHSR YLDEAEVVGL EDTRDELIGW LVEGPAERTV
201: ISVVGMGGLG KTTLAGRVFN NQKVISHFDY HAWITVSQSY TVEGLMRNLL KNLCKEKMGD LLEGISEMDR DSLIDEVRNH LKQKRYVVIF DDVWSVELWG
301: QIENAMFDNN NGSRILVTTR MEGVVNSCKK SPSDQVHKLE PLTKQESMEL FCKMAFRCHN NGRCPEELKK ISTDFVEKCK GLPLAIVAIA SLLSGKEKTP
401: FEWEKIRRSL SSEMDKNPHL IGIAKILGFS YDDLPHYLKS CLLYFGVYPE NYEVKSKRLF RQWIAEGFVK DEEGKTLEDV AEQYLTELIG TNLVQVSSFT
501: TDGKAKSCRV HDLIHDMILR KFKDLSFCQH ISKKDESMSS GMVRRLSIET ISNDLMGSSK SLHARSLLIF ADENEAWNTN FVQRIPTKYK LLKVFDFEDG
601: PSHYISIHEN WGNLAHLKYL NLRNSNMPSL KFIGKLQNLE TLDIRNTSIK KLPKEIRKLR KLRHLLGDDM KLFQLKNCLG GLTSLQTLRH VKLTMENDDG
701: VELIRELGKL KQLRNFCLTG VREEQGSALC SSISEMTNLE KLRIESYGVQ VIDLPFISSL PMLRKLSLFG KLKKLPEWVP QLQNLVKLSL EYSELTNDPL
801: KSLQNMPYLL FLGMYKAYKG ESLYFEDGGF QQLRELSLGG LRNLESIIID KGALHSLKKL KFWGIRKLKK VPPGIQHLKK LEVLDIRNMP YEFNECIAPD
901: GGPEHPIIQH VGLVEITTDF AQTRIISHLS TH

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.