Factsheet for VIT_07s0005g06210.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g06220.t01	Wine grape	cytosol	73.23	74.03
VIT_07s0005g06180.t01	Wine grape	cytosol	71.63	72.8
VIT_07s0005g06240.t01	Wine grape	cytosol	37.15	69.12
VIT_07s0005g06200.t01	Wine grape	cytosol, plasma membrane	62.95	65.7
VIT_06s0009g01350.t01	Wine grape	cytosol	42.83	63.69
KRH56221	Soybean	cytosol	44.22	46.04
VIT_05s0020g04930.t01	Wine grape	cytosol	26.45	46.0
KRH56223	Soybean	cytosol	46.15	45.71
VIT_06s0009g01360.t01	Wine grape	cytosol	52.68	45.64
VIT_02s0012g02720.t01	Wine grape	cytosol, extracellular	43.68	43.82
KRH56222	Soybean	cytosol	44.22	43.75
KRH56303	Soybean	cytosol	35.76	43.15
KRH45994	Soybean	cytosol	43.68	43.13
KRG89708	Soybean	cytosol	42.83	42.92
KRG98889	Soybean	cytosol	36.83	42.26
KRG89705	Soybean	cytosol	41.76	42.12
KRG98590	Soybean	cytosol	32.23	41.92
KRH11715	Soybean	cytosol, endoplasmic reticulum, plasma membrane	31.91	41.5
KRG98599	Soybean	cytosol	21.84	41.38
KRG98656	Soybean	cytosol	20.02	41.37
KRG98610	Soybean	cytosol	26.45	41.3
KRG98586	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.58	41.02
KRG98641	Soybean	cytosol	35.87	40.95
KRG98584	Soybean	cytosol	31.48	40.95
KRG98644	Soybean	endoplasmic reticulum	12.53	40.77
KRH46220	Soybean	cytosol	39.19	40.53
KRG98654	Soybean	peroxisome	39.61	40.53
KRG98595	Soybean	cytosol	39.72	40.33
KRH46266	Soybean	cytosol	39.08	40.29
KRG98583	Soybean	nucleus	39.61	40.26
KRG98649	Soybean	cytosol	38.97	40.18
KRG98637	Soybean	cytosol	39.61	40.17
KRG98585	Soybean	cytosol	39.4	40.04
KRH46198	Soybean	cytosol	36.94	39.93
KRG98602	Soybean	cytosol	39.29	39.89
KRH00079	Soybean	nucleus	38.44	39.8
KRG98648	Soybean	cytosol	38.01	39.58
KRG98645	Soybean	cytosol	27.84	39.57
KRG98600	Soybean	cytosol, peroxisome	24.09	39.54
KRH62703	Soybean	cytosol	27.52	39.48
KRG98651	Soybean	cytosol	33.73	39.47
KRH46576	Soybean	cytosol	27.3	39.35
KRH46192	Soybean	cytosol	38.01	39.31
KRG98640	Soybean	cytosol	36.4	39.17
KRG98720	Soybean	cytosol, plasma membrane	37.79	38.88
VIT_01s0011g00960.t01	Wine grape	nucleus	36.19	38.81
KRG98719	Soybean	cytosol	37.37	38.65
KRG98721	Soybean	cytosol	37.69	38.6
VIT_01s0011g00970.t01	Wine grape	cytosol	35.12	38.23
VIT_01s0011g00950.t01	Wine grape	cytosol, nucleus, peroxisome	36.51	38.1
KRH76365	Soybean	cytosol	28.48	38.0
KRG98632	Soybean	cytosol	30.94	37.68
KRG98659	Soybean	cytosol	15.2	37.57
KRG98635	Soybean	cytosol	14.88	37.47
VIT_01s0011g00990.t01	Wine grape	cytosol	31.8	37.41
VIT_01s0011g01020.t01	Wine grape	cytosol	36.08	37.4
VIT_00s0515g00020.t01	Wine grape	cytosol	32.23	35.5
KRG98589	Soybean	mitochondrion	6.53	34.86
Os04t0219600-01	Rice	cytosol	25.37	33.81
KRG98604	Soybean	cytosol	11.13	33.66
KRG98700	Soybean	cytosol	6.96	30.66
Os04t0219550-00	Rice	cytosol	2.25	28.0
VIT_01s0011g01000.t01	Wine grape	nucleus	37.58	22.27

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.8.430	EntrezGene:100253350	wikigene:100253350	Gene3D:3.40.50.300	Gene3D:3.80.10.10
MapMan:35.1	UniProt:A5AI84	EMBL:AM427329	ProteinID:CAN60254	ProteinID:CAN60254.1	ProteinID:CCB60269
ProteinID:CCB60269.1	EMBL:FN596502	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531	InterPro:IPR032675	InterPro:IPR036388
EntrezGene:LOC100253350	wikigene:LOC100253350	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931
PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF14	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540
UniParc:UPI000151E844	ArrayExpress:VIT_07s0005g06210	EnsemblPlantsGene:VIT_07s0005g06210	EnsemblPlants:VIT_07s0005g06210.t01	InterPro:WH-like_DNA-bd_sf	RefSeq:XP_002265617
RefSeq:XP_002265617.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7:+:11128916..11131720

Molecular Weight (calculated)

106519.0 Da

IEP (calculated)

8.086

GRAVY (calculated)

-0.215

Length

934 amino acids

Sequence
(BLAST)

001: MAEIAVTTVI DKLVSLVDEE ARLLGGVHTQ VEDIKTELLY IQAFLKDADA KADKGDISHG LKTWIQDLRK TAYSMEDLID EYLLHFANPN HRHRFFGFLC
101: KVARSIQKLK PRHEIASKIR DIKKKVGKLK ETSSSYVFIS SIEPRSSSSS ASAPWHDQRV TSLFMDETEI VGIEPLRNEL ISRLVEGNPK RTVISVVGMG
201: GLGKTTFAKK VYDNQRVVGH FDCNAWVTVS QSFKMEELLR NMTKKFYQGR KEAVPEGIDT IDEMSLIALI RQYLQDKRYV VVFDDVWKLD FWGFIKYVLP
301: ENGKGSRIII TTRNDEVASS CKESSFDYIH KLQPLSPKSS WELFCKKTFQ GGCPPELEKL SLDIVKRCGG LPLAIVAIGG LLSRKQNESE WKNFSDNLGS
401: ELESNSRLQP INTILSLSYH DLPYYLKSCF LYLAIFPEDY TIKCTKLTRL WIAEGFVKAK KGVTMEELAE EFLTELINRS LVQVSDVDLE GKIRSCHIHD
501: LMREMILKMA EEMSFCRVLA GEGSSFDGKS RRISVHNSTN NILDTIDKNS HVRSIFLFNS EMIFTSTLAS KCKLVKVLDF KDAPLESVPE DLGNLFHLKF
601: LSLRKTKVKM LPKSIGKLQN LQTLDLKHSL VEELPVEINR LQKLRHILAY NYNFDVEFSS VSVKGVHVKE GIGCLEDLQK LCFVEGNQGT DVIKELGKLR
701: QLRKLGITKL TRENGQPLCA SIMKMNHLKS LSISSSTEDE ILDLQHVSDP PPCLSRLELY GRLDKLPDWI SKLKSLVKLG LWKSRLSHDP MGVLGAQLPN
801: LLELELLQTH AVEQLCFEAI GFQKLKVLRI CDLIELKKVK IENGALPQVE ELEIGPSPQL EEVPHGIYYL RKLKTLAFRD MQEEFELSMI PYRGRNYDIV
901: EHIPNVFFYQ RLSGQHYAVQ SLRQLAETIP RVYC

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.