Factsheet for Os12t0246700-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 2
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0118800-00	Rice	cytosol	76.55	73.64
Os09t0270700-00	Rice	cytosol	25.48	36.21
Os11t0226933-01	Rice	cytosol, plasma membrane	24.84	36.12
Os07t0186500-01	Rice	cytosol	34.33	35.54
Os11t0678400-00	Rice	cytosol, mitochondrion, nucleus, peroxisome	27.08	35.28
Os12t0500500-01	Rice	endoplasmic reticulum, plasma membrane	33.48	34.85
Os10t0136100-02	Rice	cytosol	34.44	34.84
Os04t0219600-01	Rice	cytosol	26.01	34.81
Os11t0227700-01	Rice	cytosol	23.45	34.0
Os11t0227100-00	Rice	plasma membrane	18.87	33.84
Os10t0358200-00	Rice	plastid	33.37	33.55
Os08t0260800-00	Rice	cytosol	16.63	33.19
Os02t0191000-00	Rice	endoplasmic reticulum	32.09	32.97
Os11t0229400-01	Rice	plasma membrane	31.56	32.71
Os11t0229300-00	Rice	cytosol	22.49	32.41
Os11t0227200-01	Rice	plasma membrane	31.45	32.35
Os11t0227800-01	Rice	cytosol, plasma membrane	31.34	32.2
Os09t0479500-01	Rice	endoplasmic reticulum, golgi	32.94	32.19
Os09t0267800-01	Rice	cytosol	14.07	31.96
Os11t0229500-01	Rice	plasma membrane	30.49	31.74
Os08t0261000-01	Rice	plastid	26.01	31.32
Os01t0547000-01	Rice	plasma membrane	30.17	31.27
Os11t0229700-00	Rice	cytosol, plasma membrane	9.49	31.12
Os10t0163040-01	Rice	cytosol	30.28	30.77
Os06t0330100-00	Rice	cytosol	28.36	30.26
Os10t0162854-01	Rice	cytosol	20.9	30.25
Solyc08g005440.2.1	Tomato	cytosol, extracellular	29.96	30.18
Os11t0224900-00	Rice	plasma membrane	32.2	29.58
PGSC0003DMT400047578	Potato	plasma membrane	29.74	29.56
AT3G07040.1	Thale cress	cytosol	28.78	29.16
Os08t0193700-00	Rice	plastid	29.74	29.15
Os11t0639600-01	Rice	cytosol	27.61	27.7
Os10t0162832-01	Rice	plasma membrane	10.13	27.7
Os06t0698812-00	Rice	cytosol, extracellular	8.42	26.87
Os04t0219550-00	Rice	cytosol	2.13	26.67
Os08t0424700-00	Rice	cytosol	25.16	26.02
Os01t0521600-00	Rice	cytosol	3.52	23.91
Os11t0228800-00	Rice	cytosol	12.26	22.64

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:4351886	ProteinID:ABA97237.1
ProteinID:BAF29513.1	ProteinID:BAT16527.1	ncoils:Coil	ProteinID:EAZ20113.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	EnsemblPlantsGene:Os12g0246700
EnsemblPlants:Os12t0246700-01	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF2
UniProt:Q2QV19	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI00006816B4	RefSeq:XP_015619070.1
SEG:seg	:	:	:	:	:

Description

NB-ARC domain containing protein. (Os12t0246700-01)

Coordinates

chr12:+:8161472..8165176

Molecular Weight (calculated)

107534.0 Da

IEP (calculated)

7.312

GRAVY (calculated)

-0.131

Length

938 amino acids

Sequence
(BLAST)

001: MAESVVFGIL CKIGSILGSH LTQALVSHLG KEVSVLIEVE SIVKQIRSEF RLMQSFLQDG QEKESSSRQA ETFLQEVQQI AFEVEDILDE FVYYFGRKET
101: PSVELLKNFF RKSESVMPLR RIAAELKEVQ NRLQNIRNLK LQYNIDLSEE SASSIRYEDS KGHTLHHIMH NKKLVGFVNE RQKLQELLMA NERSCSIISI
201: WGMGGSGKTT LVKTVSESKA SKNRFDCQIW VTVSQTYDIT EIMRKIIQCA LKDTCSADLG SMSSEGVVLM LQETLQGRTY MMVLDDVWDT NVWFSLEGFL
301: DESSIRSKVV ITTRINDVAS LAEDKRRLQL RGLDEAESWD LFCMWAFRHG EDQTCPPAMD RVARQIVGRC EGLPLAITAV GNLLSFKRLD LMEWEKFYNQ
401: LNWELHNRLD NQGLSMVTRL LGLSYKHLPV HLKNCFLLCS IFPEDYMIRG KRLCKLLVVE GLVEPRKNMT LEEIAMEYIE KLVDRCLLQV ARRNKLGRVW
501: ELQMHDIIRE LAISISEKEG FCMIHNKAQR SVVECEPRRL SIHENSVRVQ LSINASRVRS FYQFDIDCSS VSKVQWVSRT ARYLKVLELG SVPIRKLPRD
601: IGNLFNLHYL GLRRTKIKQL PESIDRLQNL RTLDIFLTEI ASLPRGVTRL RMLRHLIAGK AVASYFGLED VFTGVKVPNG LWRSLDLNVL TGISASSNLV
701: EQLASFTQLR SLKLTDVKNI HYTKLFASIR KMQLLKNLLI GTANSDEYVS LEALDPAPQN LEILFVKGRL HDRVIGSDLF EANRLTLMEL TLENSRLSID
801: PLPSLSNFCN LTLLGLFNHY IGETLLFQAE WFPKLHTLTL AELQNVSSIV IEKHSMPNLY NFALICLTNL EDLPEGMEFL GSVEELSLVG MHQKFMEHVQ
901: GSSNVKVKHI PVVDYFDQTK GRWDRLSPLY FEDEGTKN

Best Arabidopsis Sequence Match ( AT1G58400.2 )
(BLAST)

001: MVEAIVSFGV EKLWDRLTQE YEQFQGVEDR IAELKSNLNL LKSFLKDAEA KKNTSQMVRH CVEEIKEIVY DTENMIETFI LKEAARKRSG IIRRITKLTC
101: IKVHRWEFAS DIGGISKRIS KVIQDMHSFG VQQMISDGSQ SSHLLQERER EMRQTFSRGY ESDFVGLEVN VKKLVGYLVE EDDIQIVSVT GMGGLGKTTL
201: ARQVFNHEDV KHQFDRLAWV CVSQEFTRKN VWQMILQNLT SRETKDEILQ MEEAELHDEL FQLLETSKSL IVFDDIWKEE DWGLINPIFP PKKGWKVLIT
301: SRTETIAMHG NRRYVNFKPE CLTILESWIL FQRIAMPRVD ESEFKVDKEM EMMGKQMIKY CGGLPLAVKV LGGLLAAKYT FHDWKRLSEN IGCHIVGRTD
401: FSDGNNSSVY HVLSLSFEEL PSYLKHCFLY LAHFPEDHNI KVEKLSYCWA AEGILEPRHY HGQTIRDVGE SYIEELVRRN MVIAERDVTT LRFEACHLHD
501: MMREVCLLKA KEENFVQIAS ILPPTANSQY PGTSRRFVSQ NPTTLHVSRD INNPKLQSLL IVWENRRKSW KLLGSSFIRL ELLRVLDLYK AKFEGRNLPS
601: GIGKLIHLRY LNLDLARVSR LPSSLGNLRL LIYLDINVCT KSLFVPNCLM GMHELRYLRL PFNTSKEIKL GLCNLVNLET LENFSTENSS LEDLRGMVSL
701: RTLTIGLFKH ISKETLFASI LGMRHLENLS IRTPDGSSKF KRIMEDGIVL DAIHLKQLNL RLYMPKLPDE QHFPSHLTSI SLDGCCLVED PLPILEKLLE
801: LKEVRLDFRA FCGKRMVSSD GGFPQLHRLY IWGLAEWEEW IVEEGSMPRL HTLTIWNCQK LKQLPDGLRF IYSIKDLDMD KKWKEILSEG GEEYYKVQHI
901: PSVKFEKDYK

Arabidopsis Description

Putative disease resistance protein At1g58400 [Source:UniProtKB/Swiss-Prot;Acc:Q8W3K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.