Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G092920.2 | Barley | endoplasmic reticulum, golgi | 71.03 | 71.19 |
| TraesCS2D01G418000.1 | Wheat | endoplasmic reticulum, extracellular | 59.49 | 59.1 |
| TraesCS2A01G421000.1 | Wheat | endoplasmic reticulum | 52.16 | 58.97 |
| Zm00001d023923_P001 | Maize | endoplasmic reticulum | 58.27 | 58.14 |
| Os07t0186500-01 | Rice | cytosol | 44.17 | 43.93 |
| Os09t0270700-00 | Rice | cytosol | 31.85 | 43.48 |
| Os06t0698812-00 | Rice | cytosol, extracellular | 12.54 | 38.44 |
| Os09t0267800-01 | Rice | cytosol | 16.98 | 37.05 |
| Os11t0227700-01 | Rice | cytosol | 24.42 | 34.0 |
| Os08t0260800-00 | Rice | cytosol | 17.54 | 33.62 |
| Os10t0136100-02 | Rice | cytosol | 34.52 | 33.55 |
| Os12t0246700-01 | Rice | endoplasmic reticulum | 34.85 | 33.48 |
| Os11t0226933-01 | Rice | cytosol, plasma membrane | 23.86 | 33.33 |
| Os08t0261000-01 | Rice | plastid | 28.52 | 32.99 |
| Os10t0358200-00 | Rice | plastid | 34.07 | 32.9 |
| Os10t0162854-01 | Rice | cytosol | 23.53 | 32.72 |
| Os11t0678400-00 | Rice | cytosol, mitochondrion, nucleus, peroxisome | 26.08 | 32.64 |
| Os04t0219600-01 | Rice | cytosol | 25.19 | 32.38 |
| Os02t0191000-00 | Rice | endoplasmic reticulum | 32.52 | 32.09 |
| Os09t0479500-01 | Rice | endoplasmic reticulum, golgi | 33.96 | 31.88 |
| Os01t0547000-01 | Rice | plasma membrane | 31.74 | 31.6 |
| Os04t0118800-00 | Rice | cytosol | 33.63 | 31.08 |
| Os11t0229500-01 | Rice | plasma membrane | 31.08 | 31.08 |
| Os10t0163040-01 | Rice | cytosol | 31.52 | 30.77 |
| Os11t0227200-01 | Rice | plasma membrane | 30.85 | 30.48 |
| PGSC0003DMT400047578 | Potato | plasma membrane | 31.85 | 30.4 |
| Solyc08g005440.2.1 | Tomato | cytosol, extracellular | 31.19 | 30.18 |
| Os11t0229400-01 | Rice | plasma membrane | 30.3 | 30.17 |
| Os11t0227100-00 | Rice | plasma membrane | 17.2 | 29.64 |
| Os11t0229300-00 | Rice | cytosol | 21.31 | 29.49 |
| Os11t0227800-01 | Rice | cytosol, plasma membrane | 29.74 | 29.35 |
| Os06t0330100-00 | Rice | cytosol | 28.63 | 29.35 |
| AT3G07040.1 | Thale cress | cytosol | 30.08 | 29.27 |
| Os08t0193700-00 | Rice | plastid | 30.85 | 29.05 |
| Os10t0162832-01 | Rice | plasma membrane | 10.77 | 28.28 |
| Os08t0424700-00 | Rice | cytosol | 27.97 | 27.78 |
| Os11t0224900-00 | Rice | plasma membrane | 30.63 | 27.03 |
| Os11t0639600-01 | Rice | cytosol | 27.08 | 26.1 |
| Os11t0229700-00 | Rice | cytosol, plasma membrane | 7.88 | 24.83 |
| Os01t0521600-00 | Rice | cytosol | 3.66 | 23.91 |
| Os11t0228800-00 | Rice | cytosol | 10.88 | 19.29 |
| Os04t0219550-00 | Rice | cytosol | 1.33 | 16.0 |
Protein Annotations
| Gene3D:1.10.8.430 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:4352270 | ProteinID:ABA99009.1 |
| ProteinID:BAF29837.1 | ProteinID:BAT17248.1 | ProteinID:EAZ20575.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043531 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:NB-ARC | EnsemblPlantsGene:Os12g0500500 | EnsemblPlants:Os12t0500500-01 | InterPro:P-loop_NTPase | PFAM:PF00931 |
| PRINTS:PR00364 | PANTHER:PTHR43886 | PANTHER:PTHR43886:SF17 | UniProt:Q2QQB5 | InterPro:RX-like_CC | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | SignalP:SignalP-noTM | UniParc:UPI0000681058 | RefSeq:XP_015619636.1 | SEG:seg | : |
Description
NB-ARC domain containing protein. (Os12t0500500-01)
Coordinates
chr12:-:19043758..19048583
Molecular Weight (calculated)
103622.0 Da
IEP (calculated)
8.693
GRAVY (calculated)
-0.178
Length
901 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEALILVLL QKIATTLRGA AQKAISSQLG KEATLLFDVE NSMREVECEF DVMQAFISQV DPYCTNNQVF QSWLKHIRMV TFEVEDIVDE YAFLLGKMNG
101: TESFLRKTLH KSKKLKVWYS VASRLRQVKS RVQNLTVMKE RYGIKISDND GTSSGCTANR QIHSSNSSYL NYGDDDDNAM VGQKDNVQRL TKHLNASGMD
201: RSIITIHGMG GSGKTTLARS IYRKQDITKK FDCHAWITVS RNYQIEDLLM SIMDKLKIGH RTDINLEEMV QAIHTYLENK RYLIVLDDMW DRDSWSCFED
301: AFPRRSQGSK VIITTRNKEV AKLVELQGHI ISLNTLLPIE SWDLFCKKAF SKLPEAKCPE GLIKRAEEIL EKCEGLPLAI VAIGSLLSYR GIEEKEWASF
401: YDQLNWQLTY NPELSRVSNV LSSSLNDLPT HLKNCFLYCG LFPEDRLIRR KWIIRMWIAE GFVEDRGTET TLEEVAEDYL KELTQRSLIQ VVERNEFGRP
501: RRFKLHNMVR EITWMMSKRQ RFALICDDPD VTSLGDAVRR VPVHKGGQHF QPSASWQQLR SFLLFDKHVS ISWICNASSN FRLLRVLCLR YSLLKDFPNA
601: IVGLFNLHYL DLSRTKVNKI PKSVARLKNL QTLHLRRTSV SELPCEITLL ACLRHLSVST DLYGTSFSGN VYGLRSLHTL KEIKASKNLV QNLSYLTQLR
701: SLSITNVLAN HNRDLWSSIG KLKFLTRLAV SSRDDDEVLD LENFRAPQYL EKFYLDAKLA NNVLFPISGH FQNLKLLSMR FSHLVQDPLI SLCKMANLVC
801: LELNCAYDGE ALRFCAEWFP KLKQLSLEKL ENLKSIDIID GTMVNLTYLK LSQLWNLHVV PIGLTYLKML HHLFAESMPD VFIRGLAREG FLNNSIIIEC
901: V
101: TESFLRKTLH KSKKLKVWYS VASRLRQVKS RVQNLTVMKE RYGIKISDND GTSSGCTANR QIHSSNSSYL NYGDDDDNAM VGQKDNVQRL TKHLNASGMD
201: RSIITIHGMG GSGKTTLARS IYRKQDITKK FDCHAWITVS RNYQIEDLLM SIMDKLKIGH RTDINLEEMV QAIHTYLENK RYLIVLDDMW DRDSWSCFED
301: AFPRRSQGSK VIITTRNKEV AKLVELQGHI ISLNTLLPIE SWDLFCKKAF SKLPEAKCPE GLIKRAEEIL EKCEGLPLAI VAIGSLLSYR GIEEKEWASF
401: YDQLNWQLTY NPELSRVSNV LSSSLNDLPT HLKNCFLYCG LFPEDRLIRR KWIIRMWIAE GFVEDRGTET TLEEVAEDYL KELTQRSLIQ VVERNEFGRP
501: RRFKLHNMVR EITWMMSKRQ RFALICDDPD VTSLGDAVRR VPVHKGGQHF QPSASWQQLR SFLLFDKHVS ISWICNASSN FRLLRVLCLR YSLLKDFPNA
601: IVGLFNLHYL DLSRTKVNKI PKSVARLKNL QTLHLRRTSV SELPCEITLL ACLRHLSVST DLYGTSFSGN VYGLRSLHTL KEIKASKNLV QNLSYLTQLR
701: SLSITNVLAN HNRDLWSSIG KLKFLTRLAV SSRDDDEVLD LENFRAPQYL EKFYLDAKLA NNVLFPISGH FQNLKLLSMR FSHLVQDPLI SLCKMANLVC
801: LELNCAYDGE ALRFCAEWFP KLKQLSLEKL ENLKSIDIID GTMVNLTYLK LSQLWNLHVV PIGLTYLKML HHLFAESMPD VFIRGLAREG FLNNSIIIEC
901: V
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.