Factsheet for TraesCS2D01G479400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G504900.1	Wheat	cytosol	93.89	93.89
HORVU2Hr1G107970.1	Barley	cytosol	91.67	91.46
TraesCS2A01G480100.1	Wheat	cytosol	55.44	87.7
TraesCS4D01G088900.1	Wheat	cytosol	77.0	75.99
Zm00001d052987_P001	Maize	cytosol	66.11	68.87
EES08313	Sorghum	cytosol	67.44	68.43
TraesCS3D01G440400.1	Wheat	cytosol	67.56	66.89
TraesCS3D01G440300.1	Wheat	cytosol	65.44	64.94
TraesCS1D01G017400.1	Wheat	cytosol	34.44	60.67
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	56.22	55.36
TraesCS1D01G026000.1	Wheat	cytosol, plasma membrane	57.44	55.06
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	54.44	53.49
TraesCS1D01G454100.1	Wheat	cytosol	51.44	49.47
TraesCS1D01G018800.1	Wheat	cytosol	26.67	37.97
TraesCS7D01G041300.1	Wheat	endoplasmic reticulum	32.67	37.12
TraesCS4D01G136900.1	Wheat	cytosol, endoplasmic reticulum	37.67	36.97
TraesCS7D01G140100.1	Wheat	cytosol	37.67	36.97
TraesCS7D01G040400.1	Wheat	endoplasmic reticulum	36.56	36.97
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	29.0	36.5
TraesCS7D01G039800.1	Wheat	endoplasmic reticulum, golgi	37.0	36.35
TraesCS2D01G064200.1	Wheat	cytosol	37.0	36.08
TraesCS7D01G040500.1	Wheat	cytosol	33.33	36.01
TraesCS7D01G436600.1	Wheat	cytosol	36.67	35.99
TraesCS7D01G041600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	36.67	35.99
TraesCS5D01G422100.1	Wheat	cytosol	26.33	35.91
TraesCS7D01G041000.1	Wheat	plastid	13.67	35.45
TraesCS2D01G016400.1	Wheat	endoplasmic reticulum, vacuole	16.22	35.44
TraesCS2D01G504500.1	Wheat	cytosol	36.0	35.33
TraesCS7D01G041100.1	Wheat	cytosol, extracellular	22.22	35.21
TraesCS7D01G040700.1	Wheat	cytosol	35.78	35.15
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	23.67	34.52
TraesCS7D01G041200.1	Wheat	endoplasmic reticulum	24.0	34.23
TraesCS7D01G040100.1	Wheat	cytosol	14.44	33.94
TraesCS1D01G018700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	13.33	33.8
TraesCS3D01G001100.1	Wheat	cytosol	25.0	32.14
TraesCS7D01G416200.1	Wheat	extracellular	31.56	32.09
TraesCS2D01G205500.1	Wheat	endoplasmic reticulum, extracellular	32.44	31.74
TraesCS7D01G040900.1	Wheat	endoplasmic reticulum	21.11	31.72
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	13.67	31.62
TraesCS3D01G037300.1	Wheat	golgi, plasma membrane	31.78	31.02
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	31.11	30.87
TraesCS2D01G413600.1	Wheat	plastid	25.33	29.92
TraesCS1D01G014700.1	Wheat	peroxisome	16.11	29.71
TraesCS3D01G001700.1	Wheat	cytosol	30.22	29.18
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	30.0	29.09
TraesCS1D01G017600.1	Wheat	cytosol	29.78	29.04
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	10.33	28.79
TraesCS1D01G064200.1	Wheat	plastid	24.56	28.66
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.0	28.22
Solyc08g005440.2.1	Tomato	cytosol, extracellular	29.11	28.14
AT3G07040.1	Thale cress	cytosol	28.89	28.08
TraesCS3D01G310100.1	Wheat	cytosol	27.22	27.84
PGSC0003DMT400047578	Potato	plasma membrane	28.89	27.54
TraesCS1D01G016400.1	Wheat	cytosol	12.11	25.65

Protein Annotations

EnsemblPlants:TraesCS2D01G479400.1	EnsemblPlantsGene:TraesCS2D01G479400	Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR43886	PANTHER:PTHR43886:SF25	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr2D:+:580192102..580194804

Molecular Weight (calculated)

103184.0 Da

IEP (calculated)

6.604

GRAVY (calculated)

-0.216

Length

900 amino acids

Sequence
(BLAST)

001: MAEAVLLAVT KIGCILGDEV IKAIISELSV KVTNLKELPV KVEQIRKQLT MMSNVIMQID TVYLIDKGVK NWIGEVRNVA YHVEDVMDKY SYHILKHREQ
101: SRLKKILKIK DYAVFSQIAD EVVVVEEEIE QVIKLKERWL QPFQLVPDPL TEMERRWSQD SFPEFVKDQD LVGIEENRIL LTRWLDTEET ENNVITVSGM
201: GGLGKSTLVS NVYEREKIKF PANAWIVVSQ IYTVDALLRK ILWKIGYTEK PLSAGMDKMD IYDMKKEIEK RLENRKYLIV LDDVWEPEVY FQISDAFPNL
301: QGSRIIITTR KDHVAGISSP TRHLELLPLS NPDAFKLFCR KAFHNMKDHT CPEDLETTAT SIVEKCHGLP LAIVTIGSML SSRQKLDVYK QTYNQLGHEL
401: SNNDHVRAIL NLSYHDLSDD LRNCFLYCSL FPEDYPMSRD TLVRLWVAEG FVPSKGKNTP EMVAEGNLME LVHRNMLEVV EYDELGRVSL CKMHDIMREL
501: ASSVAKEERF ASTDDYDTMM DIRRLSSCEW KEDTALKAKL SHLRTVVSVI PSSPDMLSSI LSASNYLTVL ELQDSEITEV PKSIGSQFNL RYIGLRRTKV
601: KALPDTIEHL SRLHTLDIKQ TKIEKLPRGL FKIKKLQHLF ADRFVDEKQV EFRYFNGMQA PKELSNLQEL QTLETVESSN DLAEQLKKLM QLRSLWIDNI
701: SAAECANLFA TLSNMPLLSS LLLCARDENE ALCFEALQPR STDLHKLIIR GKWAKGTLNC PIFLKHGTHL KYLALSGCHL VEDPLEMLAR HMPNLTYLRL
801: NNMHGASTLA LSANSFPNLK TLILRCMHDV SELNISEDAL PCVEGLYIIS LPKLDKVPQG IESLRSLKKL TLQCLHTDFR SQWDTNGMHQ KTLHVPEVRV

Best Arabidopsis Sequence Match ( AT1G53350.1 )
(BLAST)

001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH

Arabidopsis Description

RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.