Factsheet for TraesCS1D01G014600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G005710.1	Barley	endoplasmic reticulum	88.58	88.48
TraesCS1A01G016200.1	Wheat	cytosol	90.73	88.45
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	82.0	82.27
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	28.23	81.11
TraesCS1D01G017600.1	Wheat	cytosol	78.34	78.76
TraesCS1D01G016400.1	Wheat	cytosol	35.13	76.71
TraesCS1D01G014700.1	Wheat	peroxisome	38.69	73.57
EES08155	Sorghum	cytosol	54.85	55.81
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.71	55.41
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.5	55.2
TraesCS2D01G205500.1	Wheat	endoplasmic reticulum, extracellular	53.88	54.35
TraesCS3D01G001100.1	Wheat	cytosol	40.19	53.29
TraesCS3D01G001700.1	Wheat	cytosol	53.23	53.0
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	54.31	52.5
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.26	52.38
TraesCS3D01G037300.1	Wheat	golgi, plasma membrane	45.47	45.77
TraesCS1D01G018800.1	Wheat	cytosol	22.63	33.23
TraesCS7D01G041600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	31.68	32.06
TraesCS1D01G064200.1	Wheat	plastid	26.29	31.65
TraesCS7D01G140100.1	Wheat	cytosol	31.14	31.52
TraesCS1D01G017400.1	Wheat	cytosol	17.24	31.31
TraesCS4D01G136900.1	Wheat	cytosol, endoplasmic reticulum	30.93	31.3
TraesCS2D01G413600.1	Wheat	plastid	25.65	31.23
TraesCS5D01G422100.1	Wheat	cytosol	22.2	31.21
AT3G07040.1	Thale cress	cytosol	31.03	31.1
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	30.6	31.0
TraesCS7D01G041100.1	Wheat	cytosol, extracellular	18.97	30.99
TraesCS3D01G440300.1	Wheat	cytosol	30.28	30.98
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	30.5	30.96
TraesCS7D01G040500.1	Wheat	cytosol	27.69	30.85
TraesCS7D01G416200.1	Wheat	extracellular	29.09	30.51
TraesCS7D01G040400.1	Wheat	endoplasmic reticulum	29.2	30.45
TraesCS2D01G504500.1	Wheat	cytosol	30.06	30.43
TraesCS1D01G026000.1	Wheat	cytosol, plasma membrane	30.71	30.35
TraesCS3D01G440400.1	Wheat	cytosol	29.63	30.25
TraesCS7D01G436600.1	Wheat	cytosol	29.85	30.21
TraesCS7D01G041200.1	Wheat	endoplasmic reticulum	20.47	30.11
TraesCS7D01G039800.1	Wheat	endoplasmic reticulum, golgi	29.63	30.02
TraesCS2D01G479400.1	Wheat	cytosol, endoplasmic reticulum	29.09	30.0
TraesCS4D01G088900.1	Wheat	cytosol	29.42	29.93
TraesCS7D01G041300.1	Wheat	endoplasmic reticulum	25.43	29.8
Solyc08g005440.2.1	Tomato	cytosol, extracellular	29.63	29.54
TraesCS7D01G040700.1	Wheat	cytosol	29.09	29.48
TraesCS2D01G064200.1	Wheat	cytosol	29.31	29.47
PGSC0003DMT400047578	Potato	plasma membrane	29.85	29.34
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	22.52	29.23
TraesCS7D01G041000.1	Wheat	plastid	10.78	28.82
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	28.12	28.78
TraesCS2D01G016400.1	Wheat	endoplasmic reticulum, vacuole	12.72	28.64
TraesCS3D01G310100.1	Wheat	cytosol	27.16	28.64
TraesCS1D01G454100.1	Wheat	cytosol	28.88	28.63
KRG98601	Soybean	cytosol	11.53	28.31
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	18.75	28.2
TraesCS7D01G040100.1	Wheat	cytosol	11.53	27.94
TraesCS1D01G018700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	10.67	27.89
TraesCS7D01G040900.1	Wheat	endoplasmic reticulum	18.0	27.88
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	10.34	24.68

Protein Annotations

EnsemblPlants:TraesCS1D01G014600.1	EnsemblPlantsGene:TraesCS1D01G014600	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43886	PANTHER:PTHR43886:SF24	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr1D:-:7056154..7058940

Molecular Weight (calculated)

104098.0 Da

IEP (calculated)

8.538

GRAVY (calculated)

-0.093

Length

928 amino acids

Sequence
(BLAST)

001: MAGAVVGQLV VSLGAALAKE TAIFGGALLG KEAAALRGLF GKIRDSKVEL ESMQAYLQEA ERFKDTDKTT AIFVGEVRGF AFQIEDVVDE FTYKLEECKH
101: GGFAGKMKKR LKHIKTWHRL AAKLQEIKAQ LKDAKRRKQD YAVTGRFASS ARSINQGQAL HFTRDEDLVG IEENRDRLIR WLTIGGCSGH GLAQSSSKVT
201: SVWGMPGVGK TTLVAHVYNT VKVDFDAAAW VTVSESYRIK DLLKKIAAQF GITVDVADIE MRDLAESIHN YLQGKKFMVL DDVWAARVWS EIRNVFPTSN
301: CTGRFVITSR KHEVSLLATR ESAIHLEPLQ PHHSWVLFCK GAFWNDNVNE CPLELQELAG KFITKCQGLP IAIACIGRLL SCKSPTSAEW EDVYRGLDSQ
401: LAKDVIPDAH MILKVSLEDL PYDLKNCFLH CALSPEDYVL KRRKTMRLWI AAGFIREKDE SKTLEEVAEG YLAELVNRSL LQVVERNYAG RLKYCRMHDV
501: IRLLALNKAK EECFGKVYNG SATGAFSVDG ARRISVHGGN LEQLSRSGTT HLRALYVFGR YIEVDLLKPI LTSSKLLTML DLQGTCIKML PSEVFNMFNL
601: RYLGLRATGM ESLPEAVVRL QNLEVLDASK SKLTYLPNSV VKLKKLRYLY AWSVVTSEEF EIGNLSGVKV PNGIQQLAGL QALQSVKAAP EFLREVSALT
701: ELRTFGVCNV RSEQSADLSN AITRMSHLVH LEIVAAAENE VLQFEGLYLP PTLSSFGLAG QLEKTSIPQL FSSWSHLNSL TRLHLAFSNI DEQTFSFLHM
801: LRGLRFLEVM KAFEGKRLEF CAGSFPKLRF LHIWGAAQLN QVRIEESALK ILAELWFTDC PELKFLPDGI EHLSALEKLI LKDTSEVLIK KLQQKRDSDE
901: CSKDAMKISH IRNVTVALSH NGFEERIR

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.