Factsheet for TraesCS1D01G017400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	97.06	54.15
TraesCS1B01G021900.1	Wheat	cytosol, extracellular	96.67	53.93
Os11t0229300-00	Rice	cytosol	65.95	51.77
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	84.54	47.26
TraesCS1A01G016400.1	Wheat	endoplasmic reticulum	86.89	46.93
TraesCS1D01G026000.1	Wheat	cytosol, plasma membrane	83.95	45.69
TraesCS4D01G088900.1	Wheat	cytosol	67.51	37.83
TraesCS1D01G454100.1	Wheat	cytosol	69.28	37.82
TraesCS3D01G440300.1	Wheat	cytosol	65.36	36.82
TraesCS3D01G440400.1	Wheat	cytosol	64.38	36.19
EES09609	Sorghum	cytosol	63.41	35.72
TraesCS2D01G479400.1	Wheat	cytosol, endoplasmic reticulum	60.67	34.44
Os11t0227700-01	Rice	cytosol	42.47	33.54
TraesCS7D01G041000.1	Wheat	plastid	22.7	33.43
TraesCS7D01G040100.1	Wheat	cytosol	24.85	33.16
TraesCS1D01G018700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	22.31	32.11
TraesCS1D01G014700.1	Wheat	peroxisome	28.57	29.92
TraesCS1D01G016400.1	Wheat	cytosol	22.5	27.06
TraesCS1D01G018800.1	Wheat	cytosol	33.46	27.06
TraesCS3D01G001100.1	Wheat	cytosol	30.14	22.0
TraesCS7D01G040500.1	Wheat	cytosol	35.42	21.73
TraesCS4D01G136900.1	Wheat	cytosol, endoplasmic reticulum	37.77	21.05
TraesCS7D01G041600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	37.77	21.05
TraesCS7D01G140100.1	Wheat	cytosol	37.38	20.83
TraesCS7D01G039800.1	Wheat	endoplasmic reticulum, golgi	37.18	20.74
TraesCS2D01G064200.1	Wheat	cytosol	37.38	20.69
TraesCS2D01G504500.1	Wheat	cytosol	36.99	20.61
TraesCS7D01G040700.1	Wheat	cytosol	36.2	20.2
TraesCS7D01G436600.1	Wheat	cytosol	36.01	20.07
TraesCS7D01G040400.1	Wheat	endoplasmic reticulum	33.86	19.44
TraesCS7D01G416200.1	Wheat	extracellular	33.46	19.32
TraesCS5D01G422100.1	Wheat	cytosol	24.07	18.64
TraesCS7D01G041300.1	Wheat	endoplasmic reticulum	28.77	18.56
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	31.12	17.53
TraesCS2D01G205500.1	Wheat	endoplasmic reticulum, extracellular	31.12	17.28
TraesCS3D01G037300.1	Wheat	golgi, plasma membrane	31.12	17.25
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	31.31	17.24
TraesCS1D01G017600.1	Wheat	cytosol	31.12	17.23
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.33	16.76
TraesCS3D01G001700.1	Wheat	cytosol	30.33	16.63
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	23.09	16.5
TraesCS2D01G413600.1	Wheat	plastid	24.07	16.14
Solyc08g005440.2.1	Tomato	cytosol, extracellular	29.35	16.11
TraesCS3D01G310100.1	Wheat	cytosol	27.4	15.91
AT3G07040.1	Thale cress	cytosol	28.77	15.87
PGSC0003DMT400047578	Potato	plasma membrane	29.16	15.78
TraesCS1D01G064200.1	Wheat	plastid	21.72	14.4
TraesCS7D01G041200.1	Wheat	endoplasmic reticulum	17.03	13.79
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	15.07	12.48
TraesCS7D01G041100.1	Wheat	cytosol, extracellular	12.13	10.92
TraesCS7D01G040900.1	Wheat	endoplasmic reticulum	10.57	9.02
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	1.37	1.8
TraesCS2D01G016400.1	Wheat	endoplasmic reticulum, vacuole	0.39	0.49
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS1D01G017400.1	EnsemblPlantsGene:TraesCS1D01G017400	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	PANTHER:PTHR43886	PANTHER:PTHR43886:SF25
PFAM:PF00931	SEG:seg	SUPFAM:SSF52058	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1D:+:7821649..7823184

Molecular Weight (calculated)

57666.4 Da

IEP (calculated)

7.572

GRAVY (calculated)

-0.105

Length

511 amino acids

Sequence
(BLAST)

001: MFNHLRSELR GDNHVQPILD LSYHDLPGNL RNCFLYCSLF PEDYAISRES LVRLWVAEGF AVKKENSTPE EVAEGNLMEL IGRNMLEVVE RDELLRVSTC
101: KMHDLVRDLA LAVAKEERFG SANDPKEMIR MDKEVRRFST CGWTDSKAIV GVKFPRLRTI MSLATASPCT NMLSSVLSGS SYLTVLELQD SAITQVPASI
201: GDLFNLRYIG LRRTNIQSLP HTIDKLSNLE TLDIKQTKVE KLPPGIVNIE KLRHLLADRF ADEKQTEFRY FVGVEAPHMI SNFQELQTLE TIHASKDLSL
301: QLQTVWVDNI NASNCDDLLK TLSDMPLLSS LLLSACDQNE TLSFQALKPI STNLHRLIIR GGWADGTLKC PIFQGHGKSL KYLALSWCNL GIEDPLQLLA
401: SHLPDLTYLS LNRVSSAGIL VLSAGCFPKL KTLVLKRMPN VKQLEIKKGA IPAIDGIYIV SLSKLNMVPH GIESLETLKK LWMLDLHKDF KAQWNLNQMH
501: NKMKHVPELR V

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.