Factsheet for TraesCS5D01G083300.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035174_P001	Maize	endoplasmic reticulum	38.9	53.45
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	31.44	49.87
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	50.41	43.5
OQU89669	Sorghum	endoplasmic reticulum, golgi, plasma membrane	49.59	39.33
TraesCS6A01G056200.1	Wheat	endoplasmic reticulum	51.7	37.09
TraesCS2D01G016400.1	Wheat	endoplasmic reticulum, vacuole	23.82	35.68
Zm00001d035172_P001	Maize	endoplasmic reticulum	50.89	35.36
Zm00001d035183_P004	Maize	endoplasmic reticulum	51.86	35.36
TraesCS7D01G041100.1	Wheat	cytosol, extracellular	32.09	34.86
TraesCS7D01G041200.1	Wheat	endoplasmic reticulum	35.17	34.39
Os09t0479500-01	Rice	endoplasmic reticulum, golgi	51.7	33.23
TraesCS7D01G040900.1	Wheat	endoplasmic reticulum	30.96	31.89
TraesCS1D01G014800.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	14.59	27.86
TraesCS7D01G041300.1	Wheat	endoplasmic reticulum	34.52	26.89
TraesCS7D01G039800.1	Wheat	endoplasmic reticulum, golgi	38.57	25.98
TraesCS5D01G422100.1	Wheat	cytosol	27.23	25.45
TraesCS4D01G136900.1	Wheat	cytosol, endoplasmic reticulum	37.28	25.08
TraesCS7D01G040700.1	Wheat	cytosol	36.79	24.78
TraesCS7D01G041600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	36.79	24.75
TraesCS2D01G064200.1	Wheat	cytosol	36.95	24.7
TraesCS7D01G436600.1	Wheat	cytosol	36.47	24.54
TraesCS7D01G140100.1	Wheat	cytosol	36.14	24.32
TraesCS7D01G040500.1	Wheat	cytosol	32.74	24.25
TraesCS2D01G413600.1	Wheat	plastid	29.82	24.15
TraesCS4D01G088900.1	Wheat	cytosol	35.66	24.12
TraesCS2D01G504500.1	Wheat	cytosol	35.82	24.1
TraesCS2D01G479400.1	Wheat	cytosol, endoplasmic reticulum	34.52	23.67
TraesCS7D01G040400.1	Wheat	endoplasmic reticulum	33.71	23.37
TraesCS7D01G416200.1	Wheat	extracellular	33.06	23.05
TraesCS1D01G018800.1	Wheat	cytosol	23.01	22.47
TraesCS3D01G440300.1	Wheat	cytosol	32.41	22.05
TraesCS3D01G440400.1	Wheat	cytosol	31.93	21.67
TraesCS1D01G026000.1	Wheat	cytosol, plasma membrane	32.9	21.62
TraesCS1D01G016900.1	Wheat	cytosol, endoplasmic reticulum	31.93	21.55
TraesCS2D01G418000.1	Wheat	endoplasmic reticulum, extracellular	31.6	21.5
TraesCS1D01G015500.1	Wheat	endoplasmic reticulum	31.77	21.4
TraesCS1D01G064200.1	Wheat	plastid	26.42	21.14
AT3G07040.1	Thale cress	cytosol	30.31	20.19
TraesCS2D01G205500.1	Wheat	endoplasmic reticulum, extracellular	29.98	20.11
TraesCS1D01G454100.1	Wheat	cytosol	30.47	20.09
TraesCS3D01G037300.1	Wheat	golgi, plasma membrane	29.34	19.63
TraesCS3D01G001100.1	Wheat	cytosol	21.72	19.14
Solyc08g005440.2.1	Tomato	cytosol, extracellular	28.85	19.12
TraesCS3D01G001700.1	Wheat	cytosol	28.85	19.1
TraesCS1D01G017600.1	Wheat	cytosol	28.53	19.07
TraesCS3D01G310100.1	Wheat	cytosol	27.07	18.98
TraesCS1D01G016100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	28.2	18.81
TraesCS1D01G014600.1	Wheat	endoplasmic reticulum	28.2	18.75
PGSC0003DMT400047578	Potato	plasma membrane	28.04	18.33
TraesCS1D01G017400.1	Wheat	cytosol	12.48	15.07
TraesCS1D01G014700.1	Wheat	peroxisome	10.53	13.32
TraesCS7D01G040100.1	Wheat	cytosol	5.02	8.09
TraesCS1D01G016400.1	Wheat	cytosol	4.54	6.59
TraesCS1D01G018700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	3.24	5.63
TraesCS7D01G041000.1	Wheat	plastid	2.92	5.19

Protein Annotations

EnsemblPlants:TraesCS5D01G083300.1	EnsemblPlantsGene:TraesCS5D01G083300	Gene3D:1.10.8.430	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	ncoils:Coil
PANTHER:PTHR43886	PANTHER:PTHR43886:SF6	PFAM:PF00931	PRINTS:PR00364	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5D:-:86756578..86759256

Molecular Weight (calculated)

69892.4 Da

IEP (calculated)

6.135

GRAVY (calculated)

-0.108

Length

617 amino acids

Sequence
(BLAST)

001: MVEATILLVV QKIATAVALN AASTLANKAA AVVAIPSNMT LISNELELLQ AFFMDIEMRG HSSQVTETLV AQARRLAYHI EDVVDQYIYV VGTTHQKASP
101: WLGCVKKVAK KPKSLYTLDQ IANEIQKINQ RLQQLKQNRD WTQPTGNFPE KSYDHEHQLY IPGHDYLIAD DDLVGLDKNR ETLIKSLHLE DHPHLLMIAV
201: WGMGGIGKST LVSSVYRDQA ANFQCDAWIS ISQSCKLDEI FQQMLEKLNV QDAEESDAEN TRGVRTEEPR VKLKRLLQNR KYLIVLDDVW TPTDLLKIKE
301: VLIDNGQGSR VIITTRTHDV ASIADEGCKL KVDKLGDNDA WQLFCRKAFP KSDEHICPTD LHEYAKCIVD RCDGLPLALV AIGSMLSLRT NSAQEWKLFK
401: DQLIWELGNN KEITVVGRIL HLSYKDLPIY LKNCFLYCSI FPEDFPIGAA YLVKLLISEG FVDVRGTCSL EDVAKGYIIE LVRRNMLQVL TRNSYGEISN
501: LQMHDLVREL AILQARKESF STVYDCTYGV VPSGLASRRI GLHKCNEDFT SNVDISKART ILCFDKSMRI DIWLSILEEC KYIAVLDFSN RAIKVIPDSI
601: GELFNLKFLN FDVTQVE

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.