Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G444800.1 | Wheat | mitochondrion | 58.76 | 70.11 |
| TraesCS7A01G046200.1 | Wheat | cytosol | 62.75 | 68.52 |
| TraesCS7A01G046400.1 | Wheat | cytosol | 45.01 | 67.89 |
| TraesCS7A01G045000.1 | Wheat | cytosol | 49.0 | 67.38 |
| TraesCS7A01G045600.1 | Wheat | cytosol | 67.18 | 49.19 |
| TraesCS7D01G040700.1 | Wheat | cytosol | 87.36 | 43.01 |
| TraesCS7A01G045900.1 | Wheat | cytosol | 86.7 | 42.69 |
| TraesCS7A01G044200.1 | Wheat | cytosol | 66.3 | 34.85 |
| TraesCS4A01G224500.1 | Wheat | cytosol | 26.39 | 34.49 |
| TraesCS5A01G413500.1 | Wheat | endoplasmic reticulum, golgi | 68.96 | 33.91 |
| TraesCS7A01G045200.2 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 68.74 | 33.81 |
| TraesCS2A01G503900.1 | Wheat | plasma membrane | 68.51 | 33.7 |
| TraesCS7A01G045700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 67.85 | 33.52 |
| TraesCS7A01G045300.1 | Wheat | endoplasmic reticulum | 67.85 | 33.37 |
| TraesCS7A01G045100.1 | Wheat | endoplasmic reticulum, golgi | 67.63 | 33.3 |
| TraesCS7A01G046000.1 | Wheat | endoplasmic reticulum | 67.41 | 33.22 |
| TraesCS7A01G046900.1 | Wheat | endoplasmic reticulum, golgi | 67.41 | 33.15 |
| TraesCS4A01G444900.1 | Wheat | endoplasmic reticulum, golgi | 65.85 | 32.42 |
| TraesCS7A01G044300.2 | Wheat | endoplasmic reticulum, golgi | 64.3 | 31.69 |
| TraesCS4A01G175700.1 | Wheat | cytosol | 57.43 | 29.94 |
| TraesCS7A01G044900.1 | Wheat | cytosol | 56.54 | 29.11 |
| TraesCS7A01G045800.1 | Wheat | extracellular | 48.12 | 25.8 |
| TraesCS2A01G480100.1 | Wheat | cytosol | 31.71 | 25.13 |
| TraesCS2A01G046900.1 | Wheat | endoplasmic reticulum | 36.59 | 17.99 |
| TraesCS3A01G447600.1 | Wheat | cytosol | 33.04 | 16.43 |
| TraesCS4A01G224000.1 | Wheat | cytosol | 33.04 | 16.32 |
| TraesCS2A01G093000.1 | Wheat | cytosol | 30.6 | 16.25 |
| TraesCS6A01G056200.1 | Wheat | endoplasmic reticulum | 29.05 | 15.23 |
| TraesCS1A01G025600.1 | Wheat | cytosol, endoplasmic reticulum | 30.82 | 15.16 |
| TraesCS4A01G224100.1 | Wheat | cytosol | 30.16 | 14.91 |
| TraesCS7A01G044800.1 | Wheat | endoplasmic reticulum | 20.18 | 14.87 |
| TraesCS7A01G423400.1 | Wheat | extracellular | 30.6 | 14.68 |
| TraesCS1A01G025500.1 | Wheat | endoplasmic reticulum | 30.38 | 14.59 |
| TraesCS1A01G016400.1 | Wheat | endoplasmic reticulum | 30.38 | 14.48 |
| TraesCS2A01G046700.1 | Wheat | extracellular, plastid | 22.62 | 14.09 |
| TraesCS7A01G077800.1 | Wheat | cytosol | 28.38 | 13.99 |
| TraesCS2A01G416600.1 | Wheat | plastid | 28.38 | 13.85 |
| TraesCS3A01G043400.1 | Wheat | golgi, plasma membrane | 28.16 | 13.77 |
| Solyc08g005440.2.1 | Tomato | cytosol, extracellular | 27.72 | 13.43 |
| TraesCS4A01G376200.1 | Wheat | cytosol | 28.82 | 13.32 |
| TraesCS4A01G459500.1 | Wheat | endoplasmic reticulum, plasma membrane | 26.39 | 13.08 |
| PGSC0003DMT400047578 | Potato | plasma membrane | 27.05 | 12.92 |
| TraesCS1A01G018400.2 | Wheat | cytosol | 26.16 | 12.85 |
| AT3G07040.1 | Thale cress | cytosol | 25.94 | 12.63 |
| TraesCS3A01G321200.1 | Wheat | cytosol | 24.61 | 12.61 |
| TraesCS3A01G009900.1 | Wheat | endoplasmic reticulum, extracellular | 25.28 | 12.53 |
| TraesCS2A01G197500.1 | Wheat | golgi, vacuole | 26.16 | 12.49 |
| TraesCS1A01G017800.1 | Wheat | endoplasmic reticulum, extracellular | 25.5 | 12.29 |
| TraesCS5A01G192100.1 | Wheat | mitochondrion | 25.06 | 11.98 |
| TraesCS1A01G016200.1 | Wheat | cytosol | 25.06 | 11.87 |
| TraesCS2A01G421000.1 | Wheat | endoplasmic reticulum | 20.4 | 11.54 |
| TraesCS7A01G044700.1 | Wheat | endoplasmic reticulum | 9.09 | 7.48 |
| TraesCS7A01G046300.1 | Wheat | endoplasmic reticulum, extracellular | 5.54 | 4.85 |
| TraesCS4A01G444700.1 | Wheat | cytosol | 0.67 | 0.79 |
| TraesCS1A01G026200.1 | Wheat | cytosol, endoplasmic reticulum | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G393800.1 | EnsemblPlantsGene:TraesCS4A01G393800 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR43886 |
| PANTHER:PTHR43886:SF5 | SEG:seg | SUPFAM:SSF52058 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4A:+:669383551..669385176
Molecular Weight (calculated)
51852.1 Da
IEP (calculated)
10.495
GRAVY (calculated)
-0.164
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: MIQLVERNSF GRIKEFRMHD ILRELAVHLC QKDCFGVTYE DKCGKSLEMD VRRLVLHKVT KDIYQRLSGM HRFRTVITVD NSVPTFTILP LLCKKSRYMT
101: VLELSGLPIE KIPVAIGDLF NLCHLGLRNS KVKMLPMSVD KLSNLLTLDL ARSDIHEVPS GIVKLKKLRH LFVEKKIDPN WRAFKCSSGV HIASGLGNPT
201: NLQTLRALEA HDGSIRHLGE LRQLRSLRLW NVKGIYCGRI RDSLVQMRYL SNLSVSASDE NEVLLLNVLP NLRKLVLRGR LAEGALNESL LFQPVGGQNL
301: YRLSLSWSQL REDPLPSLSR LSNLTQIHFT RAYNGEHLAF LTRWFPKLKT PQLGDLPNLK QLEIQRGAMA NLERLFLINL NSMMEVPPGI EFLMPLQRLG
401: FHEITNEGMK RLRYDVHYCR SRKRTDPIAH SVWDSSAFLR RHLLLVPPPL R
101: VLELSGLPIE KIPVAIGDLF NLCHLGLRNS KVKMLPMSVD KLSNLLTLDL ARSDIHEVPS GIVKLKKLRH LFVEKKIDPN WRAFKCSSGV HIASGLGNPT
201: NLQTLRALEA HDGSIRHLGE LRQLRSLRLW NVKGIYCGRI RDSLVQMRYL SNLSVSASDE NEVLLLNVLP NLRKLVLRGR LAEGALNESL LFQPVGGQNL
301: YRLSLSWSQL REDPLPSLSR LSNLTQIHFT RAYNGEHLAF LTRWFPKLKT PQLGDLPNLK QLEIQRGAMA NLERLFLINL NSMMEVPPGI EFLMPLQRLG
401: FHEITNEGMK RLRYDVHYCR SRKRTDPIAH SVWDSSAFLR RHLLLVPPPL R
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.