Factsheet for TraesCS4A01G224000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G224100.1	Wheat	cytosol	81.05	81.14
TraesCS4A01G224500.1	Wheat	cytosol	30.23	80.0
Zm00001d052987_P001	Maize	cytosol	70.43	74.42
EES08313	Sorghum	cytosol	71.3	73.39
TraesCS2A01G480100.1	Wheat	cytosol	45.02	72.23
TraesCS3A01G447600.1	Wheat	cytosol	68.67	69.13
TraesCS1A01G025600.1	Wheat	cytosol, endoplasmic reticulum	61.23	60.96
TraesCS1A01G025500.1	Wheat	endoplasmic reticulum	60.35	58.68
TraesCS1A01G016400.1	Wheat	endoplasmic reticulum	60.24	58.14
TraesCS2A01G093000.1	Wheat	cytosol	53.23	57.24
TraesCS1A01G026200.1	Wheat	cytosol, endoplasmic reticulum	23.33	52.08
TraesCS7A01G045600.1	Wheat	cytosol	26.51	39.29
TraesCS4A01G444800.1	Wheat	mitochondrion	15.66	37.83
TraesCS2A01G046700.1	Wheat	extracellular, plastid	29.9	37.71
TraesCS7A01G046200.1	Wheat	cytosol	16.87	37.29
TraesCS7A01G044800.1	Wheat	endoplasmic reticulum	24.86	37.09
TraesCS7A01G046300.1	Wheat	endoplasmic reticulum, extracellular	20.92	37.09
TraesCS7A01G045100.1	Wheat	endoplasmic reticulum, golgi	36.8	36.68
TraesCS4A01G175700.1	Wheat	cytosol	34.72	36.65
TraesCS7A01G045200.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	36.8	36.64
TraesCS7A01G045000.1	Wheat	cytosol	13.14	36.59
TraesCS7A01G045700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	36.36	36.36
TraesCS4A01G444900.1	Wheat	endoplasmic reticulum, golgi	36.47	36.35
TraesCS7A01G045300.1	Wheat	endoplasmic reticulum	36.47	36.31
TraesCS7A01G044200.1	Wheat	cytosol	33.95	36.13
TraesCS7A01G046400.1	Wheat	cytosol	11.72	35.79
TraesCS2A01G503900.1	Wheat	plasma membrane	35.93	35.77
TraesCS7A01G044700.1	Wheat	endoplasmic reticulum	21.47	35.77
TraesCS7A01G044300.2	Wheat	endoplasmic reticulum, golgi	35.71	35.63
TraesCS7A01G044900.1	Wheat	cytosol	34.17	35.62
TraesCS7A01G046000.1	Wheat	endoplasmic reticulum	35.49	35.41
TraesCS7A01G045900.1	Wheat	cytosol	35.49	35.37
TraesCS7A01G046900.1	Wheat	endoplasmic reticulum, golgi	35.27	35.11
TraesCS7A01G045800.1	Wheat	extracellular	32.31	35.08
TraesCS5A01G413500.1	Wheat	endoplasmic reticulum, golgi	35.16	35.01
TraesCS2A01G046900.1	Wheat	endoplasmic reticulum	34.83	34.68
TraesCS4A01G444700.1	Wheat	cytosol	14.13	33.86
TraesCS6A01G056200.1	Wheat	endoplasmic reticulum	31.54	33.49
TraesCS4A01G393800.1	Wheat	cytosol	16.32	33.04
TraesCS3A01G043400.1	Wheat	golgi, plasma membrane	32.42	32.1
TraesCS2A01G421000.1	Wheat	endoplasmic reticulum	27.82	31.87
TraesCS7A01G423400.1	Wheat	extracellular	32.09	31.17
TraesCS3A01G009900.1	Wheat	endoplasmic reticulum, extracellular	30.89	30.99
TraesCS7A01G077800.1	Wheat	cytosol	30.78	30.71
TraesCS4A01G459500.1	Wheat	endoplasmic reticulum, plasma membrane	30.56	30.66
TraesCS2A01G197500.1	Wheat	golgi, vacuole	31.43	30.37
TraesCS1A01G016200.1	Wheat	cytosol	31.11	29.83
TraesCS1A01G018400.2	Wheat	cytosol	29.46	29.3
Solyc08g005440.2.1	Tomato	cytosol, extracellular	29.79	29.22
TraesCS1A01G017800.1	Wheat	endoplasmic reticulum, extracellular	29.9	29.17
TraesCS4A01G376200.1	Wheat	cytosol	31.11	29.1
TraesCS5A01G192100.1	Wheat	mitochondrion	29.9	28.95
TraesCS2A01G416600.1	Wheat	plastid	29.03	28.68
PGSC0003DMT400047578	Potato	plasma membrane	29.35	28.39
AT3G07040.1	Thale cress	cytosol	28.15	27.75
TraesCS3A01G321200.1	Wheat	cytosol	26.73	27.73

Protein Annotations

EnsemblPlants:TraesCS4A01G224000.1	EnsemblPlantsGene:TraesCS4A01G224000	Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR43886	PANTHER:PTHR43886:SF25	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr4A:-:531383913..531386654

Molecular Weight (calculated)

104321.0 Da

IEP (calculated)

6.705

GRAVY (calculated)

-0.157

Length

913 amino acids

Sequence
(BLAST)

001: MHYLCCSAQM AEAVLIAVTK IGSILADEAI MAIIDKLSEK VTNLKELPVK IEQIRKQLNM MSNVIRKIVT VYLTDELVKS WIGEVRNVAY HVEDVMDKYS
101: YHALQLKEEG FLKKFFIKAT HYVKVFSEIA NNVVDVEKEI QLVIQMKDQW LQPSQLDANT LAEMERQRSQ DGFPEFVKDE DLVGIEDNRI LLTKWLYSEE
201: QENTVITVSG MGGLGKSTLV SNVYEREKIN FSANAWIVVS QVYTVDALLR KLLWKIGYTE QPSSQMDVHD LKKEIQKRLE NRKYLIVLDD VWEQEVYFQI
301: RDAFQNLQGS RIIITTRKDH VAGISPSDRH LELQPLSNSD AFDLFCRRAF YNQRGHMCPK DFEIIAASIV ERCHGLPLAI VTIGSLLSSR PRLDIWTQKY
401: NQLRSELSNN DHVRAIFNLS YHDLSDDLRN CFLYCSLFPE DHPMPRDSLV RLWVAEGFVV SKEKNTPEVV AEGNLMELIH RNMLEVVETD ELGRVSTCKM
501: HDIVRELAIS VAKEERFASA NDQREMIQMD KDVRRLSACG WKENTALTLK FPRLRTVVSL GVISSSPGML SSILSESSYL SVLELQDSEI TEVPASIGHL
601: FNLRYIGLRR TKVKSLPDSV ENLSNLHTLD IKQTKIEKLP RGIVKIRKLR HLLADRYADE KQTEFRYFMG MHAPKELSNL EELQTLETVE SSNNLAEQLK
701: KLMQLSSLWI DNISAADCAL LFATLSDMPL LSSLLLSAKD ENETLCFEAL KPKSTDLRKL IIRGQWAKGT LNWPIFLDHG THLKYLALSW CDLGEDPLKI
801: LAPHLPNLTF LKLNNMHSAN TLVLSAGSFP SLKTLVLKHM PDVSQMNIID GALPCIEGLY IVSLLKLDKV PQGIESLGSL KKLWLLSLHK DFRSQWVTSG
901: MHQKIMHVPE IRV

Best Arabidopsis Sequence Match ( AT1G58390.1 )
(BLAST)

001: MAGELVSFGI KKLWDLLSQE CEQFQGVEDQ VTGLKRDLNL LSSFLKDADA KKHTTAVVRN VVEEIKEIVY DAEDIIETYL LKEKLWKTSG IKMRIRRHAC
101: IISDRRRNAL DVGGIRTRIS DVIRDMQSFG VQQAIVDGGY MQPQGDRQRE MRQTFSKDYE SDFVGLEVNV KKLVGYLVDE ENVQVVSITG MGGLGKTTLA
201: RQVFNHEDVK HQFDRLAWVC VSQEFTRKNV WQMILQNLTS REKKDEILQM EEAELHDKLF QLLETSKSLI VFDDIWKDED WDLIKPIFPP NKGWKVLLTS
301: QNESVAVRGD IKYLNFKPEC LAIEDSWTLF QRIAFPKKDA SESKVDEEME DMGKQMLKHC GGLPLAIKVL GGLLAAKYTM HDWERLSVNI GSDIVGRTSS
401: NNSSIYHVLS MSFEELPSYL KHCFLYLAHF PEDHKINVEK LSYCWAAEGI STAEDYHNGE TIQDVGQSYL EELVRRNMII WERDATASRF GTCHLHDMMR
501: EVCLFKAKEE NFLQIAVKSV GVTSSSTGNS QSPCRSRRLV YQCPTTLHVE RDINNPKLRS LVVLWHDLWV ENWKLLGTSF TRLKLLRVLD LFYVDFEGMK
601: LPFGIGNLIH LRYLSLQDAK VSHLPSSLGN LMLLIYLNLD VDTEFIFVPD VFMRMHELRY LKLPLHMHKK TRLSLRNLVK LETLVYFSTW HSSSKDLCGM
701: TRLMTLAIRL TRVTSTETLS ASISGLRNLE YLYIVGTHSK KMREEGIVLD FIHLKHLLLD LYMPRQQHFP SRLTFVKLSE CGLEEDPMPI LEKLLHLKGV
801: ILLKGSYCGR RMVCSGGGFP QLKKLEIVGL NKWEEWLVEE GSMPLLETLS ILDCEELKEI PDGLRFIYSL ELVMLGTRWK KKFSVGGEDY YKVQHIPSVE
901: FIGGYLK

Arabidopsis Description

Probable disease resistance protein At1g58390 [Source:UniProtKB/Swiss-Prot;Acc:Q8W474]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.