Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d035174_P001 | Maize | endoplasmic reticulum | 55.97 | 59.47 |
| HORVU2Hr1G007170.1 | Barley | plasma membrane | 86.79 | 45.49 |
| TraesCSU01G024000.1 | Wheat | cytosol | 78.83 | 41.05 |
| TraesCSU01G177000.1 | Wheat | cytosol | 70.23 | 36.69 |
| OQU89669 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 59.12 | 36.25 |
| Zm00001d035183_P004 | Maize | endoplasmic reticulum | 61.64 | 32.49 |
| Zm00001d035172_P001 | Maize | endoplasmic reticulum | 59.96 | 32.21 |
| Os09t0479500-01 | Rice | endoplasmic reticulum, golgi | 61.43 | 30.52 |
| TraesCSU01G007900.1 | Wheat | endoplasmic reticulum | 40.25 | 20.78 |
| AT3G07040.1 | Thale cress | cytosol | 33.12 | 17.06 |
| Solyc08g005440.2.1 | Tomato | cytosol, extracellular | 32.08 | 16.43 |
| PGSC0003DMT400047578 | Potato | plasma membrane | 32.29 | 16.31 |
Protein Annotations
| EnsemblPlants:TraesCSU01G022900.1 | EnsemblPlantsGene:TraesCSU01G022900 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | InterPro:RX-like_CC | ncoils:Coil | PANTHER:PTHR43886 |
| PANTHER:PTHR43886:SF6 | PFAM:PF00931 | PRINTS:PR00364 | SignalP:SignalP-noTM | SUPFAM:SSF52540 | TIGR:cd14798 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrUn:+:24221420..24222903
Molecular Weight (calculated)
55034.9 Da
IEP (calculated)
8.096
GRAVY (calculated)
-0.234
Length
477 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAALLLVT IKIGIAVGAE TLHYARSVAK LSENMTLIRN DLQLIRAFIK ETERRALTDG VTETWTGQVR RLAYDMEDIV DQFMYVVGKH HQKGSWWSYV
101: KKIVKKPQYL FTLGEIATGL KKINRALTHL KQKNYASQQQ LYLPGHDYSI SDDELVGFDK NRKILMGSLN LENSKFEIIA LWGMGGIGKS TLVSNVFRTE
201: ASNFEFHAWV SVSQSYKLDD IWRRMLKEIY SKDKKEFDAE KMTCRELQDE LKELLKIRQY LIILDDVWTA EDLRKIKEVL VDAKMGSRII LTTRSEEVAS
301: IAHDGCRIKV EPLEEEDAWR LFCRKAFPST ENHVCPLALQ ECGKSIVERC DGLPLALVAI GSLLSLKAQN VADWKLCDAQ LISDLHKNEN PSRVEKILNL
401: SYKYLPDYLK SCFLYCTMFP EDHMIHRKRL IRLWVAQGFV EQIGNCSLED VVEGYLTQLV QRSMLHVVER NSFNRIR
101: KKIVKKPQYL FTLGEIATGL KKINRALTHL KQKNYASQQQ LYLPGHDYSI SDDELVGFDK NRKILMGSLN LENSKFEIIA LWGMGGIGKS TLVSNVFRTE
201: ASNFEFHAWV SVSQSYKLDD IWRRMLKEIY SKDKKEFDAE KMTCRELQDE LKELLKIRQY LIILDDVWTA EDLRKIKEVL VDAKMGSRII LTTRSEEVAS
301: IAHDGCRIKV EPLEEEDAWR LFCRKAFPST ENHVCPLALQ ECGKSIVERC DGLPLALVAI GSLLSLKAQN VADWKLCDAQ LISDLHKNEN PSRVEKILNL
401: SYKYLPDYLK SCFLYCTMFP EDHMIHRKRL IRLWVAQGFV EQIGNCSLED VVEGYLTQLV QRSMLHVVER NSFNRIR
001: MAGELVSFGI KKLWDLLSQE CEQFQGVEDQ VTGLKRDLNL LSSFLKDADA KKHTTAVVRN VVEEIKEIVY DAEDIIETYL LKEKLWKTSG IKMRIRRHAC
101: IISDRRRNAL DVGGIRTRIS DVIRDMQSFG VQQAIVDGGY MQPQGDRQRE MRQTFSKDYE SDFVGLEVNV KKLVGYLVDE ENVQVVSITG MGGLGKTTLA
201: RQVFNHEDVK HQFDRLAWVC VSQEFTRKNV WQMILQNLTS REKKDEILQM EEAELHDKLF QLLETSKSLI VFDDIWKDED WDLIKPIFPP NKGWKVLLTS
301: QNESVAVRGD IKYLNFKPEC LAIEDSWTLF QRIAFPKKDA SESKVDEEME DMGKQMLKHC GGLPLAIKVL GGLLAAKYTM HDWERLSVNI GSDIVGRTSS
401: NNSSIYHVLS MSFEELPSYL KHCFLYLAHF PEDHKINVEK LSYCWAAEGI STAEDYHNGE TIQDVGQSYL EELVRRNMII WERDATASRF GTCHLHDMMR
501: EVCLFKAKEE NFLQIAVKSV GVTSSSTGNS QSPCRSRRLV YQCPTTLHVE RDINNPKLRS LVVLWHDLWV ENWKLLGTSF TRLKLLRVLD LFYVDFEGMK
601: LPFGIGNLIH LRYLSLQDAK VSHLPSSLGN LMLLIYLNLD VDTEFIFVPD VFMRMHELRY LKLPLHMHKK TRLSLRNLVK LETLVYFSTW HSSSKDLCGM
701: TRLMTLAIRL TRVTSTETLS ASISGLRNLE YLYIVGTHSK KMREEGIVLD FIHLKHLLLD LYMPRQQHFP SRLTFVKLSE CGLEEDPMPI LEKLLHLKGV
801: ILLKGSYCGR RMVCSGGGFP QLKKLEIVGL NKWEEWLVEE GSMPLLETLS ILDCEELKEI PDGLRFIYSL ELVMLGTRWK KKFSVGGEDY YKVQHIPSVE
901: FIGGYLK
101: IISDRRRNAL DVGGIRTRIS DVIRDMQSFG VQQAIVDGGY MQPQGDRQRE MRQTFSKDYE SDFVGLEVNV KKLVGYLVDE ENVQVVSITG MGGLGKTTLA
201: RQVFNHEDVK HQFDRLAWVC VSQEFTRKNV WQMILQNLTS REKKDEILQM EEAELHDKLF QLLETSKSLI VFDDIWKDED WDLIKPIFPP NKGWKVLLTS
301: QNESVAVRGD IKYLNFKPEC LAIEDSWTLF QRIAFPKKDA SESKVDEEME DMGKQMLKHC GGLPLAIKVL GGLLAAKYTM HDWERLSVNI GSDIVGRTSS
401: NNSSIYHVLS MSFEELPSYL KHCFLYLAHF PEDHKINVEK LSYCWAAEGI STAEDYHNGE TIQDVGQSYL EELVRRNMII WERDATASRF GTCHLHDMMR
501: EVCLFKAKEE NFLQIAVKSV GVTSSSTGNS QSPCRSRRLV YQCPTTLHVE RDINNPKLRS LVVLWHDLWV ENWKLLGTSF TRLKLLRVLD LFYVDFEGMK
601: LPFGIGNLIH LRYLSLQDAK VSHLPSSLGN LMLLIYLNLD VDTEFIFVPD VFMRMHELRY LKLPLHMHKK TRLSLRNLVK LETLVYFSTW HSSSKDLCGM
701: TRLMTLAIRL TRVTSTETLS ASISGLRNLE YLYIVGTHSK KMREEGIVLD FIHLKHLLLD LYMPRQQHFP SRLTFVKLSE CGLEEDPMPI LEKLLHLKGV
801: ILLKGSYCGR RMVCSGGGFP QLKKLEIVGL NKWEEWLVEE GSMPLLETLS ILDCEELKEI PDGLRFIYSL ELVMLGTRWK KKFSVGGEDY YKVQHIPSVE
901: FIGGYLK
Arabidopsis Description
Probable disease resistance protein At1g58390 [Source:UniProtKB/Swiss-Prot;Acc:Q8W474]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.