Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038456_P001 | Maize | mitochondrion | 6.48 | 6.05 |
| Zm00001d046391_P001 | Maize | plasma membrane | 6.14 | 5.71 |
| Zm00001d023262_P029 | Maize | cytosol | 18.09 | 3.89 |
| Zm00001d006546_P001 | Maize | nucleus | 3.41 | 2.99 |
Protein Annotations
| EnsemblPlants:Zm00001d016436_P003 | EnsemblPlants:Zm00001d016436_T003 | EnsemblPlantsGene:Zm00001d016436 | Gene3D:3.30.200.20 | PANTHER:PTHR11909 | PANTHER:PTHR11909:SF200 |
| ProteinID:AQK70746.1 | ProteinID:AQK70747.1 | SEG:seg | UniParc:UPI0008434EA2 | UniProt:A0A1D6H7K6 | MapMan:35.1 |
Description
No Description!
Coordinates
chr5:+:162242095..162250117
Molecular Weight (calculated)
32270.0 Da
IEP (calculated)
5.721
GRAVY (calculated)
-0.460
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MTFGGVAAFP AALGHGQQVD YGEDAGGLGD SDAGGGRYMN GRTQDDHYQD LKGLDPTVKP DSWKNGCQQS EGYGIQDSIC DDGHTETAKT KKKMDESLEP
101: SGENNNCEQV EISSKDGKKV PMKLEVSSGV QTTSSIMEQE VHSGFVGVEV SVSHILTYIY ITEYISLRVK SILLKTVPWS LLTKSPQWHM RVAFACSVCG
201: QRTTRAINPH AYTNETVFVQ GVQKHEEESV TSRHPQLHYE SKLYMLLQGG IGIPHLKWFG VEGQYNVMVI DLLGPTMETY LTAAAESSHL KQY
101: SGENNNCEQV EISSKDGKKV PMKLEVSSGV QTTSSIMEQE VHSGFVGVEV SVSHILTYIY ITEYISLRVK SILLKTVPWS LLTKSPQWHM RVAFACSVCG
201: QRTTRAINPH AYTNETVFVQ GVQKHEEESV TSRHPQLHYE SKLYMLLQGG IGIPHLKWFG VEGQYNVMVI DLLGPTMETY LTAAAESSHL KQY
001: MDRVVGGKFK LGRKLGSGSF GEIFLGVNVQ TGEEVAVKLE PLRARHPQLH YESKLYMLLQ GGTGIPHLKW FGVEGEFNCM VIDLLGPSME EFFNYCSRSF
101: SLKTVLMLAD QMINRVEYMH VKGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YLLMYFLRGS LPWQGLRAGT KKQKYDKISE KKRLTPVEVL CKNFPPEFTS YFLYVRSLRF EDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TILRYPQFGS
301: SSSSNSKPRP TLRPAMNIPV PSADKAEKPP IGQDSRERFS GVFEAYTRRN GSGTGVQADQ SSRPRTSENV LASKDTQNQE RPNSLSRNLS SSRKAIAGSS
401: VRATSSADFT ENRLSRLIPN NDRSSTTLRT QFAPSSSSVA TKAAPTRAAR DITLQSLELL SIGNSKRK
101: SLKTVLMLAD QMINRVEYMH VKGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YLLMYFLRGS LPWQGLRAGT KKQKYDKISE KKRLTPVEVL CKNFPPEFTS YFLYVRSLRF EDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TILRYPQFGS
301: SSSSNSKPRP TLRPAMNIPV PSADKAEKPP IGQDSRERFS GVFEAYTRRN GSGTGVQADQ SSRPRTSENV LASKDTQNQE RPNSLSRNLS SSRKAIAGSS
401: VRATSSADFT ENRLSRLIPN NDRSSTTLRT QFAPSSSSVA TKAAPTRAAR DITLQSLELL SIGNSKRK
Arabidopsis Description
CKL13Casein kinase 1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.