Factsheet for Zm00001d039842_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31868	Sorghum	cytosol	61.71	61.71
Os07t0617100-01	Rice	extracellular	50.29	50.29
TraesCS2A01G167900.1	Wheat	extracellular	43.43	44.19
Zm00001d006873_P001	Maize	endoplasmic reticulum, extracellular	46.86	43.62
Zm00001d026546_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, vacuole	34.29	35.71
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, plasma membrane	32.0	29.79

Protein Annotations

EMBL:BT041266	EMBL:BT042656	EnsemblPlants:Zm00001d039842_P001	EnsemblPlants:Zm00001d039842_T001	EnsemblPlantsGene:Zm00001d039842	EntrezGene:100285709
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005576	GO:GO:0016853	GO:GO:0048046
InterPro:Dirigent	PANTHER:PTHR21495	PANTHER:PTHR21495:SF85	PFAM:PF03018	ProteinID:ONM29996.1	SEG:seg
SignalP:SignalP-noTM	UniParc:UPI00017B7587	UniProt:B4FVX8	MapMan:35.1	:	:

Description

Disease resistance response protein-like; protein

Coordinates

chr3:+:16468276..16468803

Molecular Weight (calculated)

18427.2 Da

IEP (calculated)

7.179

GRAVY (calculated)

0.330

Length

175 amino acids

Sequence
(BLAST)

001: MALAHLPFVL LLVSSVAAFA AGDHGLTHIH LYVHETYTGA NATAAAVLQS PLGANSSFGS MGVVDDEIRV GPDRSSQLVG RYQGVFFGTS VQLGAGYLSS
101: ITLVFTAGEY NGSTLSVQGP LLGFTGTIER AVVGGTGKFR LARGYMLFKM ISKPTPETDV NEINLFVLMH PAGKY

Best Arabidopsis Sequence Match ( AT5G42510.1 )
(BLAST)

001: MAKRFLLLLP LLSSILLLAV SVTAYSTTTP YQGYKPEKFT HLHFYFHDVI SGDKPTAVKV AEARPTTTLN VKFGVIMIAD DPLTEGPDPS SKEVGRAQGM
101: YASTAMKDIV FTMVFNYVFT AGEFNGSTIA VYGRNDIFSK VRELPIIGGT GAFRFARGYA LPKTYKIVGL DAVVEYNVFI WH

Arabidopsis Description

DIR1Dirigent protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIG6]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.