Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
25047395
plastid: 27992503 |
msms PMID:
25047395
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G167900.1 | Wheat | extracellular | 57.14 | 58.14 |
| Zm00001d039842_P001 | Maize | extracellular | 50.29 | 50.29 |
| EES12385 | Sorghum | endoplasmic reticulum, vacuole | 52.57 | 49.2 |
| Os07t0617500-00 | Rice | extracellular | 45.71 | 42.33 |
| KXG31868 | Sorghum | cytosol | 38.86 | 38.86 |
| Os03t0400200-00 | Rice | extracellular | 39.43 | 38.76 |
| Os04t0666800-01 | Rice | extracellular | 36.57 | 37.87 |
| Os10t0398100-01 | Rice | extracellular | 36.57 | 34.04 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 32.0 | 29.79 |
Protein Annotations
| EMBL:AK240805 | EnsemblPlants:Os07t0617100-01 | EnsemblPlantsGene:Os07g0617100 | EntrezGene:4343913 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0048046 | InterPro:Dirigent | PANTHER:PTHR21495 | PANTHER:PTHR21495:SF85 | PFAM:PF03018 | ProteinID:BAC16015.1 |
| ProteinID:BAC21492.1 | ProteinID:BAF22195.2 | ProteinID:BAT02661.1 | RefSeq:XP_015645486.1 | SEG:seg | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI00000AE50D | UniProt:Q8GS22 | MapMan:35.2 | : | : |
Description
Plant disease resistance response protein family protein. (Os07t0617100-01)
Coordinates
chr7:+:25446542..25447193
Molecular Weight (calculated)
18149.6 Da
IEP (calculated)
6.516
GRAVY (calculated)
0.205
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPMPSLLLV FLVASSAAGV AAGGGGGELK HIHLYMHETF SGPNATEGGV VASPFNTTFG QVAVFDNELR TGEDRAASPL VGRYQGFIVG TGRSSPGYLT
101: SATVAFTAGE LNGSTLSLEG PFFGFAGTAE RSIVGGTGKL RLARGYYLLK LIGKTSPETA VSEIDFFVLM YSSTH
101: SATVAFTAGE LNGSTLSLEG PFFGFAGTAE RSIVGGTGKL RLARGYYLLK LIGKTSPETA VSEIDFFVLM YSSTH
001: MAKLIFFLAV QILFLAVVSS AGDGEDFART MDRKLLGLHK KEKLTHFKVY WHDILSGPNP TSIMIQPPVT NSSYFGAISM IDNALTAKVP MNSTVLGQAQ
101: GFYAGAAQKE LGFLMAMNFA FKTGKYNGST ITILGRNTAL SEVREMPIVG GSGLFRFARG YVEARTKWIN LKNGDATVEY SCYVLHY
101: GFYAGAAQKE LGFLMAMNFA FKTGKYNGST ITILGRNTAL SEVREMPIVG GSGLFRFARG YVEARTKWIN LKNGDATVEY SCYVLHY
Arabidopsis Description
DIR20Dirigent protein 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9C891]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.