Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0617100-01 | Rice | extracellular | 49.2 | 52.57 |
| TraesCS2A01G167900.1 | Wheat | extracellular | 42.78 | 46.51 |
| KXG31868 | Sorghum | cytosol | 41.71 | 44.57 |
| OQU82525 | Sorghum | extracellular | 36.9 | 40.35 |
| EER91665 | Sorghum | extracellular | 36.9 | 38.55 |
| OQU83676 | Sorghum | extracellular | 34.76 | 36.52 |
| EES13048 | Sorghum | extracellular | 32.09 | 34.68 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 29.95 | 29.79 |
Protein Annotations
| EnsemblPlants:EES12385 | EnsemblPlantsGene:SORBI_3006G122800 | EntrezGene:8058731 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0016853 | GO:GO:0048046 | InterPro:Dirigent | PANTHER:PTHR21495 | PANTHER:PTHR21495:SF85 |
| PFAM:PF03018 | ProteinID:EES12385 | ProteinID:EES12385.1 | RefSeq:XP_002448057.1 | SEG:seg | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0001A87145 | UniProt:C5YAT2 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr6:-:48864935..48866511
Molecular Weight (calculated)
19755.6 Da
IEP (calculated)
5.162
GRAVY (calculated)
0.228
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSSPMFSL FFLLLIILAA SSSSTTTVLA SSGGEDDGGV THIHLYLHET FKGANATAIT AVASPRGSNS SFGSVGVLDD ELRVGRDRSS ELVGRYQGIV
101: VGTDVDGSAD YLTCITYVFT AGEYEGSTLS MQGPVLGFNG TIERPLVGGT GKFRMARGYS LFKLLGNPTP ATVLFEIDLF VLMYRGK
101: VGTDVDGSAD YLTCITYVFT AGEYEGSTLS MQGPVLGFNG TIERPLVGGT GKFRMARGYS LFKLLGNPTP ATVLFEIDLF VLMYRGK
001: MASLYLLLLL PLFLALILAA TITESKSFST TVKAPYPGHK PDKLTHLHFY FHDIVSGDKP TSVQVANGPT TNSSATGFGL VAVVDDKLTV GPEITSEEVG
101: RAQGMYASAD QNKLGLLMAF NLVFTKGKFS DSTVAMYGRN PVLSKVREMP IIGGTGAFRF GRGYALAKTL VFNITSGDAV VEYNVYIWH
101: RAQGMYASAD QNKLGLLMAF NLVFTKGKFS DSTVAMYGRN PVLSKVREMP IIGGTGAFRF GRGYALAKTL VFNITSGDAV VEYNVYIWH
Arabidopsis Description
DIR21Dirigent protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS03]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.