CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 7
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	golgi, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0666800-01	Rice	extracellular	75.14	76.92
HORVU7Hr1G116770.1	Barley	endoplasmic reticulum	78.03	74.59
TraesCS7B01G444100.1	Wheat	extracellular	76.3	73.74
TraesCS7A01G526800.1	Wheat	extracellular	76.3	72.93
TraesCS7D01G515300.1	Wheat	extracellular	74.57	71.67
OQU82525	Sorghum	extracellular	69.94	70.76
OQU83676	Sorghum	extracellular	65.32	63.48
GSMUA_Achr7P23430_001	Banana	endoplasmic reticulum, extracellular	43.35	42.61
EER91665	Sorghum	extracellular	42.2	40.78
EES12385	Sorghum	endoplasmic reticulum, vacuole	34.68	32.09
KXG31868	Sorghum	cytosol	27.17	26.86

Protein Annotations

EnsemblPlants:EES13048	EnsemblPlantsGene:SORBI_3006G257100	EntrezGene:8082566	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005576	GO:GO:0016853	GO:GO:0048046	InterPro:Dirigent	PANTHER:PTHR21495	PANTHER:PTHR21495:SF62
PFAM:PF03018	ProteinID:EES13048	ProteinID:EES13048.1	RefSeq:XP_002448720.1	SEG:seg	SignalP:SignalP-noTM
unigene:Sbi.19854	UniParc:UPI0001A8754E	UniProt:C5YA05	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr6:-:59352942..59353934

Molecular Weight (calculated)

18195.6 Da

IEP (calculated)

6.220

GRAVY (calculated)

0.245

Length

173 amino acids

Sequence
(BLAST)

001: MAAARCSSVV LMLLLTCCCS AASAADEKLT HLHFYFHEVN AGAPNATVVN VASLHKNTST FGDLNVFDNA LREGPDPAAS RLIGRAQGIG VHASLDESGG
101: LTAINFVFSD YGEFSGSTLA TMGHFTVSGP SERSIVGGTG KLRFARGYMT SKLLSSTDTS IVVVFDMYFT LAD

Best Arabidopsis Sequence Match ( AT5G42510.1 )
(BLAST)

001: MAKRFLLLLP LLSSILLLAV SVTAYSTTTP YQGYKPEKFT HLHFYFHDVI SGDKPTAVKV AEARPTTTLN VKFGVIMIAD DPLTEGPDPS SKEVGRAQGM
101: YASTAMKDIV FTMVFNYVFT AGEFNGSTIA VYGRNDIFSK VRELPIIGGT GAFRFARGYA LPKTYKIVGL DAVVEYNVFI WH

Arabidopsis Description

DIR1Dirigent protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIG6]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.