Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G526800.1 | Wheat | extracellular | 92.18 | 91.16 |
| TraesCS7D01G515300.1 | Wheat | extracellular | 89.94 | 89.44 |
| HORVU7Hr1G116770.1 | Barley | endoplasmic reticulum | 87.71 | 86.74 |
| EES13048 | Sorghum | extracellular | 73.74 | 76.3 |
| Os04t0666800-01 | Rice | extracellular | 69.27 | 73.37 |
| OQU82525 | Sorghum | extracellular | 58.66 | 61.4 |
| Zm00001d026546_P001 | Maize | cytosol, endoplasmic reticulum, mitochondrion, vacuole | 56.42 | 60.12 |
| OQU83676 | Sorghum | extracellular | 58.1 | 58.43 |
| GSMUA_Achr7P23430_001 | Banana | endoplasmic reticulum, extracellular | 37.43 | 38.07 |
| TraesCS5B01G080000.1 | Wheat | extracellular | 36.87 | 37.5 |
| TraesCS1B01G275800.1 | Wheat | endoplasmic reticulum, extracellular | 40.78 | 37.44 |
| TraesCS5B01G303000.1 | Wheat | extracellular | 34.64 | 34.25 |
| TraesCS2B01G194000.1 | Wheat | extracellular | 32.4 | 31.69 |
| TraesCS2B01G193800.1 | Wheat | golgi, plastid, vacuole | 38.55 | 31.36 |
| TraesCS3B01G568700.1 | Wheat | extracellular | 34.64 | 31.31 |
| TraesCS3B01G030400.1 | Wheat | extracellular, vacuole | 34.64 | 31.0 |
| TraesCS4B01G385500.1 | Wheat | extracellular | 33.52 | 30.3 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G444100.1 | EnsemblPlantsGene:TraesCS7B01G444100 | InterPro:Dirigent | PANTHER:PTHR21495 | PANTHER:PTHR21495:SF62 | PFAM:PF03018 |
| PFscan:PS51257 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr7B:+:708558538..708559156
Molecular Weight (calculated)
18400.9 Da
IEP (calculated)
6.784
GRAVY (calculated)
0.427
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAARCSSFP ALCVVVVVVV LIGGCGAASG ADEEGLIHLH FYFHEVNAGT PNATVLNVAS LHKNSSTFGD LNVFDNALRA GPDPASRLVG RAQGLALHAS
101: LDESGGLTAI TFAFSDYGAY SGSTLATLGH IGVSGPAERS IVGGTGKLRF ARGYMVSSLL SSTNTSIVVV FDMYFTLGR
101: LDESGGLTAI TFAFSDYGAY SGSTLATLGH IGVSGPAERS IVGGTGKLRF ARGYMVSSLL SSTNTSIVVV FDMYFTLGR
001: MAKEEYVSRM LVMLIMIMPL VAQGSRLHSW ANRLEETGKD KVTNLQFYFH DTLSGKNPTA VKVAQGTDTE KSPTLFGAVF MVDDALTETA DPKSKLVGRA
101: QGLYGSSCKE EVGLIMAMSF CFEDGPYKDS TISMIGKNSA MNPIREMPIV GGTGMFRMAR GYAIARTNWF DPKTGDAIVG YNVTIMH
101: QGLYGSSCKE EVGLIMAMSF CFEDGPYKDS TISMIGKNSA MNPIREMPIV GGTGMFRMAR GYAIARTNWF DPKTGDAIVG YNVTIMH
Arabidopsis Description
DIR23Dirigent protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q84TH6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.