Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- vacuole 4
- extracellular 4
- endoplasmic reticulum 3
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G017500.1 | Wheat | extracellular | 76.5 | 82.26 |
| TraesCS1A01G018300.1 | Wheat | extracellular | 76.0 | 81.72 |
| TraesCS1D01G014400.1 | Wheat | endoplasmic reticulum, extracellular | 69.5 | 77.22 |
| TraesCS5B01G303000.1 | Wheat | extracellular | 50.5 | 55.8 |
| Os07t0617500-00 | Rice | extracellular | 48.0 | 50.79 |
| TraesCS2B01G193800.1 | Wheat | golgi, plastid, vacuole | 55.5 | 50.45 |
| TraesCS3B01G568700.1 | Wheat | extracellular | 43.0 | 43.43 |
| TraesCS4B01G385500.1 | Wheat | extracellular | 43.0 | 43.43 |
| TraesCS2B01G194000.1 | Wheat | extracellular | 37.5 | 40.98 |
| TraesCS5B01G080000.1 | Wheat | extracellular | 34.0 | 38.64 |
| TraesCS1B01G275800.1 | Wheat | endoplasmic reticulum, extracellular | 36.0 | 36.92 |
| TraesCS7B01G444100.1 | Wheat | extracellular | 31.0 | 34.64 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 27.0 | 28.72 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G030400.1 | EnsemblPlantsGene:TraesCS3B01G030400 | InterPro:Dirigent | PANTHER:PTHR21495 | PANTHER:PTHR21495:SF85 | PFAM:PF03018 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr3B:+:13920192..13920794
Molecular Weight (calculated)
21272.9 Da
IEP (calculated)
7.764
GRAVY (calculated)
0.304
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPMASSWNW KLLSLVFLLA STAAWGMAHA HGGGLKHIHL YMHETFTGPN ATLFAVVPPL LGVGDNTSMF GMVGVLDDEL RDGSDPSNSS LVGRFQSLFA
101: FAGLVTPPGM QTATSLVFTA GEHAGSTLVM VGSIVSSEGP YETAVVGGTG AFRMARGYCV LKAVWSPTPV STVYEVNLLV KMEGKLLAKM DAWKRTTYAL
101: FAGLVTPPGM QTATSLVFTA GEHAGSTLVM VGSIVSSEGP YETAVVGGTG AFRMARGYCV LKAVWSPTPV STVYEVNLLV KMEGKLLAKM DAWKRTTYAL
001: MAKRFLLLLP LLSTILLLSV SVTESEAYST TKPCQGYKPD KFTHLHFYFH DVISGDKPTA VKVAEARRTN SSNVNFGVIM IADDPLTEGP DPSSKEVGRA
101: QGMYALTAMK NISFTMVFNL AFTAGEFNGS TVAMYGRNEI FSKVREMPII GGTGAFRFAR GYAQAKTYKV VGLDAVVEYN VFIWH
101: QGMYALTAMK NISFTMVFNL AFTAGEFNGS TVAMYGRNEI FSKVREMPII GGTGAFRFAR GYAQAKTYKV VGLDAVVEYN VFIWH
Arabidopsis Description
DIR2Dirigent protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIG7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.