Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G073700.1 | Wheat | extracellular | 93.75 | 93.75 |
| TraesCS5D01G087200.1 | Wheat | extracellular | 92.61 | 92.09 |
| HORVU5Hr1G019400.1 | Barley | endoplasmic reticulum, extracellular | 85.23 | 81.08 |
| Os03t0400200-00 | Rice | extracellular | 50.57 | 50.0 |
| TraesCS2B01G194000.1 | Wheat | extracellular | 42.05 | 40.44 |
| TraesCS5B01G303000.1 | Wheat | extracellular | 40.91 | 39.78 |
| TraesCS7B01G444100.1 | Wheat | extracellular | 37.5 | 36.87 |
| TraesCS1B01G275800.1 | Wheat | endoplasmic reticulum, extracellular | 39.77 | 35.9 |
| TraesCS2B01G193800.1 | Wheat | golgi, plastid, vacuole | 43.75 | 35.0 |
| TraesCS3B01G030400.1 | Wheat | extracellular, vacuole | 38.64 | 34.0 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 35.23 | 32.98 |
| TraesCS3B01G568700.1 | Wheat | extracellular | 34.09 | 30.3 |
| TraesCS4B01G385500.1 | Wheat | extracellular | 34.09 | 30.3 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G080000.1 | EnsemblPlantsGene:TraesCS5B01G080000 | InterPro:Dirigent | PANTHER:PTHR21495 | PANTHER:PTHR21495:SF85 | PFAM:PF03018 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr5B:+:98025032..98025562
Molecular Weight (calculated)
18045.5 Da
IEP (calculated)
7.760
GRAVY (calculated)
0.216
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MTATIFYLLA AILAATTGTL AAGAGDDGMT HLRLYIHETF SGANATAVHV TASPLGGNST YGTLSVFDDE LRQGSNAASQ LVGRAQGISM QADLQDSGVF
101: STLLTVVFTN GGYKGSTLVL GGRVDFGPDG KAAAERAVVG GTGRFRLARG YSLMSKLGAT SSTAVLKLDL YVKTDV
101: STLLTVVFTN GGYKGSTLVL GGRVDFGPDG KAAAERAVVG GTGRFRLARG YSLMSKLGAT SSTAVLKLDL YVKTDV
001: MAKRFLLLLP LLSSILLLAV SVTAYSTTTP YQGYKPEKFT HLHFYFHDVI SGDKPTAVKV AEARPTTTLN VKFGVIMIAD DPLTEGPDPS SKEVGRAQGM
101: YASTAMKDIV FTMVFNYVFT AGEFNGSTIA VYGRNDIFSK VRELPIIGGT GAFRFARGYA LPKTYKIVGL DAVVEYNVFI WH
101: YASTAMKDIV FTMVFNYVFT AGEFNGSTIA VYGRNDIFSK VRELPIIGGT GAFRFARGYA LPKTYKIVGL DAVVEYNVFI WH
Arabidopsis Description
DIR1Dirigent protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIG6]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.