Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G080000.1 | Wheat | extracellular | 81.08 | 85.23 |
| TraesCS5A01G073700.1 | Wheat | extracellular | 80.54 | 84.66 |
| TraesCS5D01G087200.1 | Wheat | extracellular | 79.46 | 83.05 |
| Os03t0400200-00 | Rice | extracellular | 50.27 | 52.25 |
| HORVU5Hr1G079380.2 | Barley | endoplasmic reticulum | 37.3 | 38.55 |
| HORVU1Hr1G065080.1 | Barley | endoplasmic reticulum, extracellular | 38.92 | 37.5 |
| HORVU7Hr1G116770.1 | Barley | endoplasmic reticulum | 35.68 | 36.46 |
| HORVU2Hr1G030840.1 | Barley | endoplasmic reticulum | 11.35 | 36.21 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 30.81 | 30.32 |
| HORVU7Hr1G118770.1 | Barley | mitochondrion, plastid | 31.89 | 28.92 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G019400.1 | EnsemblPlantsGene:HORVU5Hr1G019400 | InterPro:Dirigent | PANTHER:PTHR21495 | PANTHER:PTHR21495:SF85 | PFAM:PF03018 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:85178758..85186356
Molecular Weight (calculated)
18970.4 Da
IEP (calculated)
6.509
GRAVY (calculated)
0.164
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: VDKSMLNPNL TSLAITMTAT TFCLLAAILA ATTGTLAAGA GDDGTTHLHL YIHETFSGAN ATAVHVTASP LGGNSTYGTL SVFDDELRQG SDAASQLVGR
101: AQGITMQTDL QSSGVFSTLL TVVFTNGDYK GSTLVLNGRV DFGPDGKAAA ERAVVGGTGR FRLARGYSLM SKFGATSSTA VLKLD
101: AQGITMQTDL QSSGVFSTLL TVVFTNGDYK GSTLVLNGRV DFGPDGKAAA ERAVVGGTGR FRLARGYSLM SKFGATSSTA VLKLD
001: MLQITNMATP FLLLLLPLIF STVLLLTITV TQSKPYSKTT PFQGNKPDKL THLHFYFHDI ISGDKPTTIR VAEAPGTNSS ATVFGAVLIV DAPVTEGPEL
101: SSKEVGRAQG LYASTDMKTF GFTMVFNFVF TEGEFNGSTA ALYGRNPILL EERELPIIGG TGDFRFARGY ALPKTYKVVN IDAVVEYNVF IWH
101: SSKEVGRAQG LYASTDMKTF GFTMVFNFVF TEGEFNGSTA ALYGRNPILL EERELPIIGG TGDFRFARGY ALPKTYKVVN IDAVVEYNVF IWH
Arabidopsis Description
DIR11Dirigent protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q67YM6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.