Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G529600.1 | Wheat | endoplasmic reticulum, extracellular | 66.67 | 77.27 |
| TraesCS7D01G529500.1 | Wheat | extracellular | 53.92 | 62.15 |
| TraesCSU01G200800.1 | Wheat | extracellular, plastid, vacuole | 60.78 | 61.69 |
| Os07t0617500-00 | Rice | extracellular | 42.65 | 46.03 |
| HORVU5Hr1G079380.2 | Barley | endoplasmic reticulum | 39.71 | 45.25 |
| HORVU2Hr1G030840.1 | Barley | endoplasmic reticulum | 12.25 | 43.1 |
| HORVU1Hr1G065080.1 | Barley | endoplasmic reticulum, extracellular | 31.37 | 33.33 |
| HORVU5Hr1G019400.1 | Barley | endoplasmic reticulum, extracellular | 28.92 | 31.89 |
| HORVU7Hr1G116770.1 | Barley | endoplasmic reticulum | 27.45 | 30.94 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 26.47 | 28.72 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G118770.1 | EnsemblPlantsGene:HORVU7Hr1G118770 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0016853 | GO:GO:0048046 | InterPro:Dirigent | PANTHER:PTHR21495 | PANTHER:PTHR21495:SF85 | PFAM:PF03018 |
| SEG:seg | SignalP:SignalP-noTM | UniParc:UPI000B46DEA9 | UniProt:A0A287XZE8 | MapMan:35.1 | : |
Description
Dirigent protein [Source:UniProtKB/TrEMBL;Acc:A0A287XZE8]
Coordinates
chrchr7H:+:648324199..648325345
Molecular Weight (calculated)
21690.3 Da
IEP (calculated)
10.302
GRAVY (calculated)
0.081
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: RQIPSLGRAR CIATTIHTLP QQRHSSRRPA MTAPSSPLLM LALLLLTSSA CTSAKADDLK LIRVYMHETL SGPNATVLSS VQSPLGGNAT FGQMGVLDNE
101: LRDGPRRGGS SELGRFQGLF AMTGSGRALS ILSAVNVVFT AGEHRGSTLA MLGTIHDLRA TVERTIVGGT GAFRMVRGYG LIDYVPEAST PGHDVYRVDL
201: FVVV
101: LRDGPRRGGS SELGRFQGLF AMTGSGRALS ILSAVNVVFT AGEHRGSTLA MLGTIHDLRA TVERTIVGGT GAFRMVRGYG LIDYVPEAST PGHDVYRVDL
201: FVVV
001: MAKRFLLLLP LLSTILLLSV SVTESEAYST TKPCQGYKPD KFTHLHFYFH DVISGDKPTA VKVAEARRTN SSNVNFGVIM IADDPLTEGP DPSSKEVGRA
101: QGMYALTAMK NISFTMVFNL AFTAGEFNGS TVAMYGRNEI FSKVREMPII GGTGAFRFAR GYAQAKTYKV VGLDAVVEYN VFIWH
101: QGMYALTAMK NISFTMVFNL AFTAGEFNGS TVAMYGRNEI FSKVREMPII GGTGAFRFAR GYAQAKTYKV VGLDAVVEYN VFIWH
Arabidopsis Description
DIR2Dirigent protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIG7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.