Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G200800.1 | Wheat | extracellular, plastid, vacuole | 85.8 | 75.12 |
| TraesCS7D01G529500.1 | Wheat | extracellular | 72.73 | 72.32 |
| HORVU7Hr1G118770.1 | Barley | mitochondrion, plastid | 77.27 | 66.67 |
| TraesCS2D01G175300.1 | Wheat | extracellular | 56.82 | 55.56 |
| TraesCS5D01G309500.1 | Wheat | extracellular | 56.25 | 54.4 |
| TraesCS5D01G309400.1 | Wheat | extracellular | 49.43 | 50.58 |
| TraesCS4D01G359300.1 | Wheat | extracellular | 56.82 | 50.51 |
| Os07t0617500-00 | Rice | extracellular | 51.7 | 48.15 |
| TraesCS1D01G014400.1 | Wheat | endoplasmic reticulum, extracellular | 48.86 | 47.78 |
| TraesCS1D01G017500.1 | Wheat | extracellular | 46.59 | 44.09 |
| TraesCS2D01G175400.1 | Wheat | extracellular | 45.45 | 43.48 |
| TraesCS5D01G087200.1 | Wheat | extracellular | 35.8 | 35.59 |
| TraesCS1D01G265300.1 | Wheat | endoplasmic reticulum | 36.36 | 32.99 |
| TraesCS7D01G515300.1 | Wheat | extracellular | 33.52 | 32.78 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 32.39 | 30.32 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G529600.1 | EnsemblPlantsGene:TraesCS7D01G529600 | InterPro:Dirigent | PANTHER:PTHR21495 | PANTHER:PTHR21495:SF85 | PFAM:PF03018 |
| SEG:seg | SignalP:SignalP-noTM | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr7D:+:624780634..624781164
Molecular Weight (calculated)
18443.3 Da
IEP (calculated)
7.676
GRAVY (calculated)
0.229
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAPSSPLLT LVLLLLTSSP AVACAHPGGD LKRIRVYMHE TLSGPNATLL TSVQSPLGGS ATFGQIGVLD NELRDGPDRG SSSLLGRFQG LFAMTGLAST
101: PGLLSAVNVV FTAGQHRGST LAMLGTIQDL RATVERTVVG GTGAFRMARG YSSMVYVPEA STTNHDVYRI DFFVDV
101: PGLLSAVNVV FTAGQHRGST LAMLGTIQDL RATVERTVVG GTGAFRMARG YSSMVYVPEA STTNHDVYRI DFFVDV
001: MAKLIFFLAV QILFLAVVSS AGDGEDFART MDRKLLGLHK KEKLTHFKVY WHDILSGPNP TSIMIQPPVT NSSYFGAISM IDNALTAKVP MNSTVLGQAQ
101: GFYAGAAQKE LGFLMAMNFA FKTGKYNGST ITILGRNTAL SEVREMPIVG GSGLFRFARG YVEARTKWIN LKNGDATVEY SCYVLHY
101: GFYAGAAQKE LGFLMAMNFA FKTGKYNGST ITILGRNTAL SEVREMPIVG GSGLFRFARG YVEARTKWIN LKNGDATVEY SCYVLHY
Arabidopsis Description
DIR20Dirigent protein 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9C891]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.