Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 2
- mitochondrion 2
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G529600.1 | Wheat | endoplasmic reticulum, extracellular | 75.12 | 85.8 |
| TraesCS7D01G529500.1 | Wheat | extracellular | 59.2 | 67.23 |
| HORVU7Hr1G118770.1 | Barley | mitochondrion, plastid | 61.69 | 60.78 |
| Os07t0617500-00 | Rice | extracellular | 43.28 | 46.03 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 27.36 | 29.26 |
Protein Annotations
| EnsemblPlants:TraesCSU01G200800.1 | EnsemblPlantsGene:TraesCSU01G200800 | InterPro:Dirigent | PANTHER:PTHR21495 | PANTHER:PTHR21495:SF85 | PFAM:PF03018 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrUn:-:298778962..298779567
Molecular Weight (calculated)
21357.0 Da
IEP (calculated)
9.518
GRAVY (calculated)
0.146
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPRPRPLHH QHILLPQLLT SPSRPAMTAP LLTLVLLLLT SSVAVACASA DPKGDLKRIR VYMHETMSGP NATLLTSVQS PLGGSATFGQ IGVLDNELRD
101: GLHRGSSSPL GRFQGLFAMT GLANTPGLLS AVDVVFTGGK YQGSTLAMLG TIQDLRASVE RTVVGGTGAF RMARGYSSMV YIPEASTANN DVYRIDFFVD
201: V
101: GLHRGSSSPL GRFQGLFAMT GLANTPGLLS AVDVVFTGGK YQGSTLAMLG TIQDLRASVE RTVVGGTGAF RMARGYSSMV YIPEASTANN DVYRIDFFVD
201: V
001: MAKLIFFLAV QILFLAVVSS AGDGEDFART MDRKLLGLHK KEKLTHFKVY WHDILSGPNP TSIMIQPPVT NSSYFGAISM IDNALTAKVP MNSTVLGQAQ
101: GFYAGAAQKE LGFLMAMNFA FKTGKYNGST ITILGRNTAL SEVREMPIVG GSGLFRFARG YVEARTKWIN LKNGDATVEY SCYVLHY
101: GFYAGAAQKE LGFLMAMNFA FKTGKYNGST ITILGRNTAL SEVREMPIVG GSGLFRFARG YVEARTKWIN LKNGDATVEY SCYVLHY
Arabidopsis Description
DIR20Dirigent protein 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9C891]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.