Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G309500.1 | Wheat | extracellular | 80.81 | 76.37 |
| HORVU5Hr1G079380.2 | Barley | endoplasmic reticulum | 79.07 | 75.98 |
| TraesCS5B01G303000.1 | Wheat | extracellular | 77.33 | 73.48 |
| TraesCS2D01G175300.1 | Wheat | extracellular | 65.12 | 62.22 |
| TraesCS5A01G302700.1 | Wheat | extracellular | 76.74 | 56.41 |
| TraesCS7D01G529600.1 | Wheat | endoplasmic reticulum, extracellular | 50.58 | 49.43 |
| TraesCS1D01G014400.1 | Wheat | endoplasmic reticulum, extracellular | 50.0 | 47.78 |
| TraesCS7D01G529500.1 | Wheat | extracellular | 47.67 | 46.33 |
| Os07t0617500-00 | Rice | extracellular | 50.58 | 46.03 |
| TraesCS1D01G017500.1 | Wheat | extracellular | 48.26 | 44.62 |
| TraesCS4D01G359300.1 | Wheat | extracellular | 48.26 | 41.92 |
| TraesCS2D01G175400.1 | Wheat | extracellular | 43.02 | 40.22 |
| TraesCS5D01G087200.1 | Wheat | extracellular | 35.47 | 34.46 |
| TraesCS1D01G265300.1 | Wheat | endoplasmic reticulum | 38.37 | 34.02 |
| TraesCS7D01G515300.1 | Wheat | extracellular | 32.56 | 31.11 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 28.49 | 26.06 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G309400.1 | EnsemblPlantsGene:TraesCS5D01G309400 | InterPro:Dirigent | PANTHER:PTHR21495 | PANTHER:PTHR21495:SF85 | PFAM:PF03018 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr5D:-:406421003..406422876
Molecular Weight (calculated)
17720.6 Da
IEP (calculated)
6.665
GRAVY (calculated)
0.405
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRSSPSLFL LLLLALWTAP YLAARAGTGA SDHGLTHIHL YMPLGADATF GAVGVLDDEL RDGPDAGNSS LVGRYQGLFV SAGLVSPPGA QSAINLVFTA
101: GEHRGSTLAM LGPMLSFTSA IERAVVGGTG AFRMARGYCV MTPAGSPTLR GRPVPGHVPC LIDVCLLGLE VD
101: GEHRGSTLAM LGPMLSFTSA IERAVVGGTG AFRMARGYCV MTPAGSPTLR GRPVPGHVPC LIDVCLLGLE VD
001: MAKRFLLLLP LLSTILLLSV SVTESEAYST TKPCQGYKPD KFTHLHFYFH DVISGDKPTA VKVAEARRTN SSNVNFGVIM IADDPLTEGP DPSSKEVGRA
101: QGMYALTAMK NISFTMVFNL AFTAGEFNGS TVAMYGRNEI FSKVREMPII GGTGAFRFAR GYAQAKTYKV VGLDAVVEYN VFIWH
101: QGMYALTAMK NISFTMVFNL AFTAGEFNGS TVAMYGRNEI FSKVREMPII GGTGAFRFAR GYAQAKTYKV VGLDAVVEYN VFIWH
Arabidopsis Description
DIR2Dirigent protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIG7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.