Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G065080.1 | Barley | endoplasmic reticulum, extracellular | 93.3 | 94.27 |
| TraesCS1A01G265100.1 | Wheat | endoplasmic reticulum, extracellular | 85.57 | 89.25 |
| TraesCS1B01G275800.1 | Wheat | endoplasmic reticulum, extracellular | 74.23 | 73.85 |
| Os10t0398100-01 | Rice | extracellular | 58.76 | 60.64 |
| EER91665 | Sorghum | extracellular | 52.06 | 56.42 |
| GSMUA_Achr9P11260_001 | Banana | endoplasmic reticulum, extracellular | 42.27 | 52.9 |
| GSMUA_Achr9P11230_001 | Banana | extracellular | 48.45 | 52.81 |
| GSMUA_Achr8P15720_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 43.3 | 49.12 |
| GSMUA_Achr8P15710_001 | Banana | extracellular | 46.39 | 48.39 |
| GSMUA_Achr8P15700_001 | Banana | endoplasmic reticulum, vacuole | 43.3 | 48.28 |
| GSMUA_Achr9P11220_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 42.78 | 47.43 |
| GSMUA_Achr1P02720_001 | Banana | endoplasmic reticulum, vacuole | 40.21 | 44.32 |
| GSMUA_Achr9P11240_001 | Banana | extracellular, vacuole | 41.24 | 43.72 |
| GSMUA_Achr9P11250_001 | Banana | extracellular | 40.72 | 42.93 |
| GSMUA_Achr9P11270_001 | Banana | endoplasmic reticulum, mitochondrion, plastid, vacuole | 44.33 | 41.95 |
| TraesCS2D01G175300.1 | Wheat | extracellular | 38.14 | 41.11 |
| TraesCS7D01G515300.1 | Wheat | extracellular | 38.14 | 41.11 |
| TraesCS5D01G309500.1 | Wheat | extracellular | 37.11 | 39.56 |
| TraesCS1D01G014400.1 | Wheat | endoplasmic reticulum, extracellular | 36.6 | 39.44 |
| TraesCS5D01G087200.1 | Wheat | extracellular | 35.57 | 38.98 |
| TraesCS5D01G309400.1 | Wheat | extracellular | 34.02 | 38.37 |
| TraesCS1D01G017500.1 | Wheat | extracellular | 35.05 | 36.56 |
| TraesCS7D01G529600.1 | Wheat | endoplasmic reticulum, extracellular | 32.99 | 36.36 |
| TraesCS7D01G529500.1 | Wheat | extracellular | 32.99 | 36.16 |
| TraesCS4D01G359300.1 | Wheat | extracellular | 34.54 | 33.84 |
| TraesCS2D01G175400.1 | Wheat | extracellular | 30.41 | 32.07 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G265300.1 | EnsemblPlantsGene:TraesCS1D01G265300 | InterPro:Dirigent | PANTHER:PTHR21495 | PANTHER:PTHR21495:SF46 | PFAM:PF03018 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr1D:-:361115854..361116438
Molecular Weight (calculated)
19837.7 Da
IEP (calculated)
6.802
GRAVY (calculated)
0.282
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPHRASAA RPLPLLAPLV ALLFLAAATT TATAAADGVP TAAGNGGMTH LHFYFHEIYT AGPNGTTAAV ASPPAGAGGS SFGFGSVTVV DDMLREGADP
101: ASRLIGRAQG LTAAASLSEV AITTLLNFVF TDGPYNGSTL AMFGRALLGT VMERPIVGGT GAFRMARGYT HSRMVKSADP DNQLVLEYDA YVLH
101: ASRLIGRAQG LTAAASLSEV AITTLLNFVF TDGPYNGSTL AMFGRALLGT VMERPIVGGT GAFRMARGYT HSRMVKSADP DNQLVLEYDA YVLH
001: MAKRFLLLLP LLSTILLLSV SVTESEAYST TKPCQGYKPD KFTHLHFYFH DVISGDKPTA VKVAEARRTN SSNVNFGVIM IADDPLTEGP DPSSKEVGRA
101: QGMYALTAMK NISFTMVFNL AFTAGEFNGS TVAMYGRNEI FSKVREMPII GGTGAFRFAR GYAQAKTYKV VGLDAVVEYN VFIWH
101: QGMYALTAMK NISFTMVFNL AFTAGEFNGS TVAMYGRNEI FSKVREMPII GGTGAFRFAR GYAQAKTYKV VGLDAVVEYN VFIWH
Arabidopsis Description
DIR2Dirigent protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIG7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.