Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P15710_001 | Banana | extracellular | 66.67 | 61.29 |
| GSMUA_Achr8P15700_001 | Banana | endoplasmic reticulum, vacuole | 61.99 | 60.92 |
| GSMUA_Achr1P02720_001 | Banana | endoplasmic reticulum, vacuole | 60.23 | 58.52 |
| GSMUA_Achr9P11220_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 52.05 | 50.86 |
| GSMUA_Achr9P11230_001 | Banana | extracellular | 52.63 | 50.56 |
| GSMUA_Achr9P11260_001 | Banana | endoplasmic reticulum, extracellular | 44.44 | 49.03 |
| GSMUA_Achr9P11270_001 | Banana | endoplasmic reticulum, mitochondrion, plastid, vacuole | 57.89 | 48.29 |
| GSMUA_Achr9P11240_001 | Banana | extracellular, vacuole | 51.46 | 48.09 |
| GSMUA_Achr9P11250_001 | Banana | extracellular | 49.71 | 46.2 |
| TraesCS1A01G265100.1 | Wheat | endoplasmic reticulum, extracellular | 49.71 | 45.7 |
| HORVU1Hr1G065080.1 | Barley | endoplasmic reticulum, extracellular | 49.71 | 44.27 |
| TraesCS1D01G265300.1 | Wheat | endoplasmic reticulum | 49.12 | 43.3 |
| TraesCS1B01G275800.1 | Wheat | endoplasmic reticulum, extracellular | 49.12 | 43.08 |
| EER91665 | Sorghum | extracellular | 45.03 | 43.02 |
| GSMUA_Achr7P23430_001 | Banana | endoplasmic reticulum, extracellular | 39.77 | 38.64 |
| Os10t0398100-01 | Rice | extracellular | 42.11 | 38.3 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 32.75 | 29.79 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P15720_001 | EnsemblPlants:GSMUA_Achr8T15720_001 | EnsemblPlantsGene:GSMUA_Achr8G15720_001 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0016853 | GO:GO:0048046 | InterPro:Dirigent | PANTHER:PTHR21495 | PANTHER:PTHR21495:SF46 |
| PFAM:PF03018 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI000295440D | UniProt:M0TQS5 | MapMan:35.1 |
Description
dirigent, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G15720_001]
Coordinates
chr8:-:13405324..13406049
Molecular Weight (calculated)
18353.0 Da
IEP (calculated)
4.795
GRAVY (calculated)
0.225
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSPSLPLL LLFLFAAIAI VSSDEPKENM THLHFYLHVY YGGPNATTVT VVSPPGNSTF GSIGVGNNIL KEGPEPSSML IGRTNDLTAQ ASIESPSYLY
101: MLNFVFTAGE YNGSSIAIVG REVLGMTSER TIVGGTGMFR MARGYTVSTL ISSTGTTELF LVSEYDAYIY H
101: MLNFVFTAGE YNGSSIAIVG REVLGMTSER TIVGGTGMFR MARGYTVSTL ISSTGTTELF LVSEYDAYIY H
001: MAKRFLLLLP LLSSILLLAV SVTAYSTTTP YQGYKPEKFT HLHFYFHDVI SGDKPTAVKV AEARPTTTLN VKFGVIMIAD DPLTEGPDPS SKEVGRAQGM
101: YASTAMKDIV FTMVFNYVFT AGEFNGSTIA VYGRNDIFSK VRELPIIGGT GAFRFARGYA LPKTYKIVGL DAVVEYNVFI WH
101: YASTAMKDIV FTMVFNYVFT AGEFNGSTIA VYGRNDIFSK VRELPIIGGT GAFRFARGYA LPKTYKIVGL DAVVEYNVFI WH
Arabidopsis Description
DIR1Dirigent protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIG6]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.