CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G275800.1	Wheat	endoplasmic reticulum, extracellular	60.34	55.38
TraesCS1A01G265100.1	Wheat	endoplasmic reticulum, extracellular	57.54	55.38
Os10t0398100-01	Rice	extracellular	56.42	53.72
HORVU1Hr1G065080.1	Barley	endoplasmic reticulum, extracellular	56.98	53.12
TraesCS1D01G265300.1	Wheat	endoplasmic reticulum	56.42	52.06
GSMUA_Achr9P11260_001	Banana	endoplasmic reticulum, extracellular	41.9	48.39
GSMUA_Achr8P15720_001	Banana	endoplasmic reticulum, extracellular, vacuole	43.02	45.03
GSMUA_Achr9P11230_001	Banana	extracellular	44.69	44.94
GSMUA_Achr8P15700_001	Banana	endoplasmic reticulum, vacuole	43.02	44.25
GSMUA_Achr8P15710_001	Banana	extracellular	45.81	44.09
GSMUA_Achr9P11220_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	42.46	43.43
OQU82525	Sorghum	extracellular	40.78	42.69
EES13048	Sorghum	extracellular	40.78	42.2
GSMUA_Achr1P02720_001	Banana	endoplasmic reticulum, vacuole	41.34	42.05
GSMUA_Achr9P11250_001	Banana	extracellular	42.46	41.3
GSMUA_Achr9P11240_001	Banana	extracellular, vacuole	41.9	40.98
GSMUA_Achr9P11270_001	Banana	endoplasmic reticulum, mitochondrion, plastid, vacuole	45.25	39.51
OQU83676	Sorghum	extracellular	37.43	37.64
EES12385	Sorghum	endoplasmic reticulum, vacuole	38.55	36.9
KXG31868	Sorghum	cytosol	28.49	29.14

Protein Annotations

EnsemblPlants:EER91665	EnsemblPlantsGene:SORBI_3001G256800	EntrezGene:8059636	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005576	GO:GO:0016853	GO:GO:0048046	InterPro:Dirigent	PANTHER:PTHR21495	PANTHER:PTHR21495:SF46
PFAM:PF03018	ProteinID:EER91665	ProteinID:EER91665.1	RefSeq:XP_002464667.1	SEG:seg	SignalP:SignalP-noTM
UniParc:UPI0001A820C8	UniProt:C5WMC9	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:30100262..30100934

Molecular Weight (calculated)

18924.8 Da

IEP (calculated)

6.337

GRAVY (calculated)

0.278

Length

179 amino acids

Sequence
(BLAST)

001: MAPCHCAMLP LFCSLVFSMA AAVVGETGGD VGRPTHLHFY FHENFSGGPN GTTVVVSKVR GGSNNSSFFG GVFVVDDMLR EGPDPASQLL GRAQGLTVGT
101: SLSDGALLTV LNFVFTEGAY SGSSLTLLGR ALLGTVMERP IVGGTGVFRM ARGYTLSKMV QSPDPNNLLV LEYDAYIWH

Best Arabidopsis Sequence Match ( AT5G42510.1 )
(BLAST)

001: MAKRFLLLLP LLSSILLLAV SVTAYSTTTP YQGYKPEKFT HLHFYFHDVI SGDKPTAVKV AEARPTTTLN VKFGVIMIAD DPLTEGPDPS SKEVGRAQGM
101: YASTAMKDIV FTMVFNYVFT AGEFNGSTIA VYGRNDIFSK VRELPIIGGT GAFRFARGYA LPKTYKIVGL DAVVEYNVFI WH

Arabidopsis Description

DIR1Dirigent protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIG6]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.