CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	extracellular, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82525	Sorghum	extracellular	64.04	66.67
Zm00001d026546_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, vacuole	62.36	66.07
EES13048	Sorghum	extracellular	63.48	65.32
Os04t0666800-01	Rice	extracellular	57.87	60.95
TraesCS7B01G444100.1	Wheat	extracellular	58.43	58.1
HORVU7Hr1G116770.1	Barley	endoplasmic reticulum	58.99	58.01
TraesCS7D01G515300.1	Wheat	extracellular	57.3	56.67
TraesCS7A01G526800.1	Wheat	extracellular	57.3	56.35
GSMUA_Achr7P23430_001	Banana	endoplasmic reticulum, extracellular	41.01	41.48
EER91665	Sorghum	extracellular	37.64	37.43
EES12385	Sorghum	endoplasmic reticulum, vacuole	36.52	34.76
KXG31868	Sorghum	cytosol	29.21	29.71

Protein Annotations

EnsemblPlants:OQU83676	EnsemblPlantsGene:SORBI_3005G159100	EntrezGene:8062635	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005576	GO:GO:0016853	GO:GO:0048046	InterPro:Dirigent	PANTHER:PTHR21495	PANTHER:PTHR21495:SF62
PFAM:PF03018	PFscan:PS51257	ProteinID:OQU83676	ProteinID:OQU83676.1	RefSeq:XP_002450987.1	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0001A86BE1	UniProt:A0A1Z5RJX5	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr5:-:63286287..63287139

Molecular Weight (calculated)

18904.3 Da

IEP (calculated)

6.929

GRAVY (calculated)

0.046

Length

178 amino acids

Sequence
(BLAST)

001: MAAARCPSLV LMLLLSCTCY GAASAAADGK LIHLHFYFHE VRAGAPNATV VSVVSLNNKS AGAFGDVKVL DNELREGPDP ESRLIGRAQG FGVNASLDGS
101: SYFSAIDFVF SGDDGEYSGS TVSAQGRFDP TGRRTDERSI VGGTGKLRFA RGYMTSRILS STNSYLVAVF DMYLTLAH

Best Arabidopsis Sequence Match ( AT1G22900.1 )
(BLAST)

001: MLQITNMATP FLLLLLPLIF STVLLLTITV TQSKPYSKTT PFQGNKPDKL THLHFYFHDI ISGDKPTTIR VAEAPGTNSS ATVFGAVLIV DAPVTEGPEL
101: SSKEVGRAQG LYASTDMKTF GFTMVFNFVF TEGEFNGSTA ALYGRNPILL EERELPIIGG TGDFRFARGY ALPKTYKVVN IDAVVEYNVF IWH

Arabidopsis Description

DIR11Dirigent protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q67YM6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.