Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G444100.1 | Wheat | extracellular | 86.74 | 87.71 |
| TraesCS7A01G526800.1 | Wheat | extracellular | 86.19 | 86.19 |
| TraesCS7D01G515300.1 | Wheat | extracellular | 85.08 | 85.56 |
| EES13048 | Sorghum | extracellular | 74.59 | 78.03 |
| Os04t0666800-01 | Rice | extracellular | 70.17 | 75.15 |
| OQU82525 | Sorghum | extracellular | 59.67 | 63.16 |
| Zm00001d026546_P001 | Maize | cytosol, endoplasmic reticulum, mitochondrion, vacuole | 55.8 | 60.12 |
| OQU83676 | Sorghum | extracellular | 58.01 | 58.99 |
| HORVU2Hr1G030840.1 | Barley | endoplasmic reticulum | 12.71 | 39.66 |
| HORVU1Hr1G065080.1 | Barley | endoplasmic reticulum, extracellular | 41.99 | 39.58 |
| GSMUA_Achr7P23430_001 | Banana | endoplasmic reticulum, extracellular | 37.02 | 38.07 |
| HORVU5Hr1G019400.1 | Barley | endoplasmic reticulum, extracellular | 36.46 | 35.68 |
| HORVU5Hr1G079380.2 | Barley | endoplasmic reticulum | 34.81 | 35.2 |
| HORVU7Hr1G118770.1 | Barley | mitochondrion, plastid | 30.94 | 27.45 |
Protein Annotations
| EMBL:AK366583 | EnsemblPlants:HORVU7Hr1G116770.1 | EnsemblPlantsGene:HORVU7Hr1G116770 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0016853 | GO:GO:0048046 | InterPro:Dirigent | PANTHER:PTHR21495 | PANTHER:PTHR21495:SF62 |
| PFAM:PF03018 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0002006E87 | UniProt:F2DRR5 |
| MapMan:35.1 | : | : | : | : | : |
Description
Dirigent protein [Source:UniProtKB/TrEMBL;Acc:F2DRR5]
Coordinates
chrchr7H:+:644113772..644114743
Molecular Weight (calculated)
18698.3 Da
IEP (calculated)
6.505
GRAVY (calculated)
0.311
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKKEAIMAA ARCSSFPALC VVAVLIGGAG AADEEAGLIH LHFYFHEVNA GTPNATVVNV ASLHKNSSTF GDLNVLDNAL RAGPDPASRL VGRAQGLALH
101: ASLDESGGLT AITFDFSDYG AYSGSTLATL GHIGVSGPAE RSIVGGTGKL RFARGYMVSS LLSSTDTSIV VVFDMYFTLA R
101: ASLDESGGLT AITFDFSDYG AYSGSTLATL GHIGVSGPAE RSIVGGTGKL RFARGYMVSS LLSSTDTSIV VVFDMYFTLA R
001: MAKEEYVSRM LVMLIMIMPL VAQGSRLHSW ANRLEETGKD KVTNLQFYFH DTLSGKNPTA VKVAQGTDTE KSPTLFGAVF MVDDALTETA DPKSKLVGRA
101: QGLYGSSCKE EVGLIMAMSF CFEDGPYKDS TISMIGKNSA MNPIREMPIV GGTGMFRMAR GYAIARTNWF DPKTGDAIVG YNVTIMH
101: QGLYGSSCKE EVGLIMAMSF CFEDGPYKDS TISMIGKNSA MNPIREMPIV GGTGMFRMAR GYAIARTNWF DPKTGDAIVG YNVTIMH
Arabidopsis Description
DIR23Dirigent protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q84TH6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.