Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G309500.1 | Wheat | extracellular | 81.01 | 79.67 |
| TraesCS5D01G309400.1 | Wheat | extracellular | 75.98 | 79.07 |
| TraesCS5B01G303000.1 | Wheat | extracellular | 79.33 | 78.45 |
| HORVU2Hr1G030840.1 | Barley | endoplasmic reticulum | 19.55 | 60.34 |
| TraesCS5A01G302700.1 | Wheat | extracellular | 74.3 | 56.84 |
| Os07t0617500-00 | Rice | extracellular | 51.96 | 49.21 |
| HORVU7Hr1G118770.1 | Barley | mitochondrion, plastid | 45.25 | 39.71 |
| HORVU5Hr1G019400.1 | Barley | endoplasmic reticulum, extracellular | 38.55 | 37.3 |
| HORVU1Hr1G065080.1 | Barley | endoplasmic reticulum, extracellular | 37.43 | 34.9 |
| HORVU7Hr1G116770.1 | Barley | endoplasmic reticulum | 35.2 | 34.81 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 28.49 | 27.13 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G079380.2 | EnsemblPlantsGene:HORVU5Hr1G079380 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0048046 | InterPro:Dirigent |
| PANTHER:PTHR21495 | PANTHER:PTHR21495:SF85 | PFAM:PF03018 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI000B46B2ED |
| UniProt:A0A287RYA1 | MapMan:35.2 | : | : | : | : |
Description
Dirigent protein [Source:UniProtKB/TrEMBL;Acc:A0A287RYA1]
Coordinates
chrchr5H:+:556751079..556751727
Molecular Weight (calculated)
16676.2 Da
IEP (calculated)
8.499
GRAVY (calculated)
0.291
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPSLPSLLL VLLLALWTAP YLATRAGAGA GDHGLTHIHL YMHETFAGRN ATVPSPLQGA GATFGAVGVL DDELRDGPDA RNSSLVGRYQ GLFVSAGLVS
101: PPGGQSAINL VFTAGERRGS TLAMLGPVLS FTSAIERAVV GGTGAFRMAR GYCVMTPAGS PTPXXXXXXX XXXXXXXXX
101: PPGGQSAINL VFTAGERRGS TLAMLGPVLS FTSAIERAVV GGTGAFRMAR GYCVMTPAGS PTPXXXXXXX XXXXXXXXX
001: MAKRFLLLLP LLSTILLLSV SVTESEAYST TKPCQGYKPD KFTHLHFYFH DVISGDKPTA VKVAEARRTN SSNVNFGVIM IADDPLTEGP DPSSKEVGRA
101: QGMYALTAMK NISFTMVFNL AFTAGEFNGS TVAMYGRNEI FSKVREMPII GGTGAFRFAR GYAQAKTYKV VGLDAVVEYN VFIWH
101: QGMYALTAMK NISFTMVFNL AFTAGEFNGS TVAMYGRNEI FSKVREMPII GGTGAFRFAR GYAQAKTYKV VGLDAVVEYN VFIWH
Arabidopsis Description
DIR2Dirigent protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIG7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.