Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G073700.1 | Wheat | extracellular | 94.92 | 95.45 |
| TraesCS5B01G080000.1 | Wheat | extracellular | 92.09 | 92.61 |
| HORVU5Hr1G019400.1 | Barley | endoplasmic reticulum, extracellular | 83.05 | 79.46 |
| Os03t0400200-00 | Rice | extracellular | 51.41 | 51.12 |
| TraesCS2D01G175300.1 | Wheat | extracellular | 43.5 | 42.78 |
| TraesCS2D01G175400.1 | Wheat | extracellular | 41.81 | 40.22 |
| TraesCS5D01G309500.1 | Wheat | extracellular | 41.24 | 40.11 |
| TraesCS7D01G529600.1 | Wheat | endoplasmic reticulum, extracellular | 35.59 | 35.8 |
| TraesCS1D01G265300.1 | Wheat | endoplasmic reticulum | 38.98 | 35.57 |
| TraesCS7D01G515300.1 | Wheat | extracellular | 36.16 | 35.56 |
| TraesCS5D01G309400.1 | Wheat | extracellular | 34.46 | 35.47 |
| TraesCS7D01G529500.1 | Wheat | extracellular | 35.03 | 35.03 |
| TraesCS1D01G014400.1 | Wheat | endoplasmic reticulum, extracellular | 35.59 | 35.0 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 35.03 | 32.98 |
| TraesCS1D01G017500.1 | Wheat | extracellular | 34.46 | 32.8 |
| TraesCS4D01G359300.1 | Wheat | extracellular | 35.03 | 31.31 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G087200.1 | EnsemblPlantsGene:TraesCS5D01G087200 | InterPro:Dirigent | PANTHER:PTHR21495 | PANTHER:PTHR21495:SF85 | PFAM:PF03018 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr5D:+:92450113..92455850
Molecular Weight (calculated)
18316.7 Da
IEP (calculated)
5.613
GRAVY (calculated)
0.145
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MTATIFYLLA AVLAATTGTL VAGAGDDGTT HIRLYIHETF SGANATAVHV TDSPLGGNST YGTLSVFDDE LRQGSDAASQ LVGRAQGITM QADLQDSGVF
101: STLLTMLSFT DGGYKGSTLV LSGRVDFGPD GKAAAERAVV GGTGRFRLAR GYSLMSKFGT TSSTAVLKLD LYVKTDV
101: STLLTMLSFT DGGYKGSTLV LSGRVDFGPD GKAAAERAVV GGTGRFRLAR GYSLMSKFGT TSSTAVLKLD LYVKTDV
001: MAKRFLLLLP LLSSILLLAV SVTAYSTTTP YQGYKPEKFT HLHFYFHDVI SGDKPTAVKV AEARPTTTLN VKFGVIMIAD DPLTEGPDPS SKEVGRAQGM
101: YASTAMKDIV FTMVFNYVFT AGEFNGSTIA VYGRNDIFSK VRELPIIGGT GAFRFARGYA LPKTYKIVGL DAVVEYNVFI WH
101: YASTAMKDIV FTMVFNYVFT AGEFNGSTIA VYGRNDIFSK VRELPIIGGT GAFRFARGYA LPKTYKIVGL DAVVEYNVFI WH
Arabidopsis Description
DIR1Dirigent protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIG6]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.