Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G087200.1 | Wheat | extracellular | 95.45 | 94.92 |
| TraesCS5B01G080000.1 | Wheat | extracellular | 93.75 | 93.75 |
| HORVU5Hr1G019400.1 | Barley | endoplasmic reticulum, extracellular | 84.66 | 80.54 |
| Os03t0400200-00 | Rice | extracellular | 52.27 | 51.69 |
| TraesCS2A01G167600.1 | Wheat | mitochondrion | 43.75 | 46.39 |
| TraesCS2A01G167800.1 | Wheat | extracellular | 42.05 | 40.44 |
| TraesCS2A01G167900.1 | Wheat | extracellular | 35.8 | 36.63 |
| TraesCS1A01G265100.1 | Wheat | endoplasmic reticulum, extracellular | 38.07 | 36.02 |
| TraesCS7A01G526800.1 | Wheat | extracellular | 35.23 | 34.25 |
| TraesCS1A01G018300.1 | Wheat | extracellular | 35.23 | 33.33 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 35.23 | 32.98 |
| TraesCS5A01G549300.1 | Wheat | extracellular | 34.66 | 30.81 |
| TraesCS5A01G302700.1 | Wheat | extracellular | 38.07 | 28.63 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G073700.1 | EnsemblPlantsGene:TraesCS5A01G073700 | InterPro:Dirigent | PANTHER:PTHR21495 | PANTHER:PTHR21495:SF85 | PFAM:PF03018 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr5A:+:86166402..86167299
Molecular Weight (calculated)
17992.3 Da
IEP (calculated)
6.790
GRAVY (calculated)
0.191
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MTATTFCLLA AVLAATTGTL VAGAGGDGTT HIRLYIHETF SGANATAVHV TDSPLGGNST YGTLSVFDDE LRQGSDAASQ LVGRAQGITM QADLQDSGVF
101: STLLTVVFTN GGYKGSTLVL GGRVDFGPDG KAAAERAVVG GTGRFRLARG YSLMSKFGAT SSTAVLKLDL YVKTDV
101: STLLTVVFTN GGYKGSTLVL GGRVDFGPDG KAAAERAVVG GTGRFRLARG YSLMSKFGAT SSTAVLKLDL YVKTDV
001: MAKRFLLLLP LLSSILLLAV SVTAYSTTTP YQGYKPEKFT HLHFYFHDVI SGDKPTAVKV AEARPTTTLN VKFGVIMIAD DPLTEGPDPS SKEVGRAQGM
101: YASTAMKDIV FTMVFNYVFT AGEFNGSTIA VYGRNDIFSK VRELPIIGGT GAFRFARGYA LPKTYKIVGL DAVVEYNVFI WH
101: YASTAMKDIV FTMVFNYVFT AGEFNGSTIA VYGRNDIFSK VRELPIIGGT GAFRFARGYA LPKTYKIVGL DAVVEYNVFI WH
Arabidopsis Description
DIR1Dirigent protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIG6]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.