Subcellular Localization
min:
: max
Winner_takes_all: golgi, plastid, vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G175300.1 | Wheat | extracellular | 79.09 | 96.67 |
| TraesCS2A01G167600.1 | Wheat | mitochondrion | 72.27 | 95.78 |
| HORVU2Hr1G030840.1 | Barley | endoplasmic reticulum | 23.64 | 89.66 |
| TraesCS5B01G303000.1 | Wheat | extracellular | 59.09 | 71.82 |
| Os07t0617500-00 | Rice | extracellular | 50.0 | 58.2 |
| TraesCS3B01G030400.1 | Wheat | extracellular, vacuole | 50.45 | 55.5 |
| TraesCS3B01G568700.1 | Wheat | extracellular | 43.18 | 47.98 |
| TraesCS4B01G385500.1 | Wheat | extracellular | 42.73 | 47.47 |
| TraesCS5B01G080000.1 | Wheat | extracellular | 35.0 | 43.75 |
| TraesCS2B01G194000.1 | Wheat | extracellular | 36.36 | 43.72 |
| TraesCS7B01G444100.1 | Wheat | extracellular | 31.36 | 38.55 |
| TraesCS1B01G275800.1 | Wheat | endoplasmic reticulum, extracellular | 34.09 | 38.46 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 25.91 | 30.32 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G193800.1 | EnsemblPlantsGene:TraesCS2B01G193800 | InterPro:Dirigent | PANTHER:PTHR21495 | PANTHER:PTHR21495:SF85 | PFAM:PF03018 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:170851824..170852486
Molecular Weight (calculated)
23090.9 Da
IEP (calculated)
6.223
GRAVY (calculated)
0.280
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MHAGQRSGCY GIHYEPYQPI DRVALYSSGC ESIPQRFLIA MTSSSPLLLL SLILAWSAPA FLLARAGAGD QGLKHIHLYM HETFAGPNAT AIVTVPSPLG
101: ANATFGVVGV LDDELRDGPD PKSSSLVGRY QGIFAGAGLV SPPGMQSAIN FVFTAGEHSG STLAMLGPVL SFTGAIERSV VGGTGAFRMA RGYCVMMAAG
201: NPTPDSIVYE VDLFVKMDYA
101: ANATFGVVGV LDDELRDGPD PKSSSLVGRY QGIFAGAGLV SPPGMQSAIN FVFTAGEHSG STLAMLGPVL SFTGAIERSV VGGTGAFRMA RGYCVMMAAG
201: NPTPDSIVYE VDLFVKMDYA
001: MAKRFLLLLP LLSSILLLAV SVTAYSTTTP YQGYKPEKFT HLHFYFHDVI SGDKPTAVKV AEARPTTTLN VKFGVIMIAD DPLTEGPDPS SKEVGRAQGM
101: YASTAMKDIV FTMVFNYVFT AGEFNGSTIA VYGRNDIFSK VRELPIIGGT GAFRFARGYA LPKTYKIVGL DAVVEYNVFI WH
101: YASTAMKDIV FTMVFNYVFT AGEFNGSTIA VYGRNDIFSK VRELPIIGGT GAFRFARGYA LPKTYKIVGL DAVVEYNVFI WH
Arabidopsis Description
DIR1Dirigent protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIG6]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.