Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU79329 | Sorghum | plasma membrane | 82.11 | 80.9 |
| TraesCS5A01G087400.1 | Wheat | cytosol | 57.4 | 66.22 |
| HORVU5Hr1G022730.3 | Barley | cytosol | 66.03 | 65.19 |
| TraesCS5D01G098700.1 | Wheat | cytosol | 65.6 | 64.84 |
| Os12t0564800-01 | Rice | plastid | 66.13 | 63.82 |
| TraesCS5D01G098800.2 | Wheat | plastid | 60.6 | 62.39 |
| Zm00001d017954_P001 | Maize | extracellular | 45.05 | 45.68 |
| Zm00001d007688_P002 | Maize | cytosol | 18.32 | 41.05 |
| Zm00001d018786_P004 | Maize | cytosol | 38.55 | 40.13 |
| Zm00001d007323_P001 | Maize | cytosol | 37.81 | 36.86 |
| Zm00001d040743_P001 | Maize | cytosol | 29.71 | 35.5 |
| Zm00001d007056_P001 | Maize | cytosol | 35.14 | 34.92 |
Protein Annotations
| Gene3D:1.10.8.430 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A1D6MX08 | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:NB-ARC | ProteinID:ONM33290.1 | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF37 | InterPro:RX-like_CC | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI0008425580 | EnsemblPlantsGene:Zm00001d041584 |
| EnsemblPlants:Zm00001d041584_P001 | EnsemblPlants:Zm00001d041584_T001 | SEG:seg | : | : | : |
Description
NB-ARC domain containing protein expressed; protein
Coordinates
chr3:+:128389890..128392834
Molecular Weight (calculated)
106621.0 Da
IEP (calculated)
6.759
GRAVY (calculated)
-0.196
Length
939 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLLWKLGT LLSDEHRLLS SVKVDMVSLK AEVEGMHAFL KKMSEVEDPD EQSKCWMQEV RELSYDIEDN IDSFMLTLGS CTESSSKPRG FKGCVARFLN
101: LFAGAKAHHW AAKEIQRLKR QAVEASDRRG RYSHRVGDAV AVPRSSRTSI DPRLPALYAE TTRLVGVDGP RNRLIKLLTT EREGTVTELN VFSIVGSGGL
201: GKTTLASEVY RRLEAQFDYR AFVSVSQNPD MKKILRHILC HRGCGGSEEW DEQQLIHAVR EFLQDKRYFV VIDDIWSTSA WRIIRCAFPE NNCSSRILTT
301: TRIVTVAKYC CSPHLDRVYA LQPLDAAHSE SLFLSRIFGS EGRCPLHLKE ASDKILKRCG GLPLAIVTVA SLLATKGITK EEWEKTLKSI GSALEIQDTD
401: VEEMKKILLI SYNDLPYHLK TCLLYLGVFP EDYEIKRDRL IRRWVAEGFI TAEGGQDMEE IGECYFNDLI NRSMIQPVGI QCDGRADACR VHDMVLDLIV
501: SKSAEENFLT LCGDGDHRMA RRDKARRLSI NYHARDGIVV PENMVVSNVR SLTIFGHAED MSALSNFLFL RVLDLENRVV LEYNYLRHIG RLRQLRYLRL
601: SSRRIAALPE QIGDLQNLQT LDLRWTRLKR LPRSVVLLRR LTCLLVNSLE LPEGIGNMQA LQELSEIEIN RHTPVSSLLE LGKLTNLRIL GINWCIIDAD
701: HDARKVHADS LVTSLCKLGV LSLRSIQIQS YHTCSLDFLQ DSWFPPPRRL QKFDMSIDYH FPRTPKWMVS LEYLSYLDIY LTPVDEESFR TLGDLPSLLF
801: LWISSREARP GEGVAVGSHG FRCLREFYFT CWEVGTGLAF EPGAMPALEK LRIPCNARGA CSSHAGVRDL GIGRLSSSLR HLQVEIVCRG ARLQEVEAVE
901: EAVRNAASEI SDELFLGVSR WDEEEILKDE EHKLEEAEA
101: LFAGAKAHHW AAKEIQRLKR QAVEASDRRG RYSHRVGDAV AVPRSSRTSI DPRLPALYAE TTRLVGVDGP RNRLIKLLTT EREGTVTELN VFSIVGSGGL
201: GKTTLASEVY RRLEAQFDYR AFVSVSQNPD MKKILRHILC HRGCGGSEEW DEQQLIHAVR EFLQDKRYFV VIDDIWSTSA WRIIRCAFPE NNCSSRILTT
301: TRIVTVAKYC CSPHLDRVYA LQPLDAAHSE SLFLSRIFGS EGRCPLHLKE ASDKILKRCG GLPLAIVTVA SLLATKGITK EEWEKTLKSI GSALEIQDTD
401: VEEMKKILLI SYNDLPYHLK TCLLYLGVFP EDYEIKRDRL IRRWVAEGFI TAEGGQDMEE IGECYFNDLI NRSMIQPVGI QCDGRADACR VHDMVLDLIV
501: SKSAEENFLT LCGDGDHRMA RRDKARRLSI NYHARDGIVV PENMVVSNVR SLTIFGHAED MSALSNFLFL RVLDLENRVV LEYNYLRHIG RLRQLRYLRL
601: SSRRIAALPE QIGDLQNLQT LDLRWTRLKR LPRSVVLLRR LTCLLVNSLE LPEGIGNMQA LQELSEIEIN RHTPVSSLLE LGKLTNLRIL GINWCIIDAD
701: HDARKVHADS LVTSLCKLGV LSLRSIQIQS YHTCSLDFLQ DSWFPPPRRL QKFDMSIDYH FPRTPKWMVS LEYLSYLDIY LTPVDEESFR TLGDLPSLLF
801: LWISSREARP GEGVAVGSHG FRCLREFYFT CWEVGTGLAF EPGAMPALEK LRIPCNARGA CSSHAGVRDL GIGRLSSSLR HLQVEIVCRG ARLQEVEAVE
901: EAVRNAASEI SDELFLGVSR WDEEEILKDE EHKLEEAEA
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.